Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05421 ATGGCTCGCTCTTTCGCTAACATTAAGGTTCTCTCTACTATCATCCTCGACGGTTTTTCCAACACTCTTACCAGACGAGGTTACTCTGCGGCAACAGAAAGTGCAACGAAGGGATCAGTTGGGTCAATTGGAACCAAGATGGGAGGCACAAAGTTAGGAGAAGAGAAAGATGCTTCTGCTTATAAGGCTACATGGGTTCCAGATCCTGTCACTGGTTACTATAAACCTGAGAACGTTAAGGATATTGATGTCGCTGATTTGAGGGCAAAGTTGCTTCGTAAAAATTTCAAGAATTAA 297 0.431 MARSFANIKVLSTIILDGFSNTLTRRGYSAATESATKGSVGSIGTKMGGTKLGEEKDASAYKATWVPDPVTGYYKPENVKDIDVADLRAKLLRKNFKN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05421 98 Pfam Late embryogenesis abundant protein 1 92 IPR004926 -
Vivi6g05421 98 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 95 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05421 Vivi-Chr6 159711432 159712101 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05421 - - gmx:100527032 127.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05421 6 159711432 159712101 Vivi1g05319 1 116206810 116207430 PCT