Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05419 ATGAACCCCTCAAAACCTCCGCGCCGGAAAGTCATCCAAGCAAACGGCGACGACTCCGGCGACAAACAGGACCAGCTCCTTCTCTCCTCCGCCATATGCAACAACGAAGACTTAGGTCCCTTCATCCGCAAAGCCTTCGCTTCCGGCAAGCCGGAAACTCTCCAGCACCACCTCAAGCACTTCTCTCGCTCCAAAGAGTCCGAGATCGAAGAAGTATGCAAGGCGCACTACCAGGACTTCATCCTCGCCGTCGACGACCTCCGATCGCTTCTATCCGAAGTCGAATCGCTCAAGTCTTCCCTCTCCGATTCCAACTCCAAGCTCCAATCCGTCGCGCGTCCGCTCCTCACCTCGCTTGACTCGTTCGTCGAAACGCGAAACGTTTCGAGGAACGTTAGTCTCGCTGTTGAATCAGTCGGAGCGTGTGTTCAGTTGATGGAAGTTTGCTCACGCGCTAACAGCCATCTCGCCGGGGATAACTTCTACATGGCGTTAAAGTGTGTTGATGCAATCGAGAGAGATTATTTGGATAAAACGTCGTCGTCGACTCTGAAGAAGATGCTGGAGAAGAAGATTCCGGAGATTCGGTCTTACATAGAGAGAAAAGTGAACAAGGAGTTCGGTGACTGGTTGGTTGAGATCCGAGTGGTGAGTCGCAATTTAGGTCAATTGGCAATTGGTCAAGCTTCATCAGCGAGACAGAGAGAAGAGGATCTTAGAATCAAACAGCGTCAAGCGGAGGAGCAGAGTAGACTCAGCGTTAGGGATTGCATTTATGCGTTGGAGGAAGAAGATGAAGATGGAGTCGCGGCCGGGATCGGAGATGAAGGTCATAGTAACGGTAATGGTAACAGTGGTGGAGTTTTGGGATTTGATTTGACTCCGTTGTATAGAGCTTACCATATTCATCAAACGTTAGGGTTAGAGGATGGGTTTAAGCAATATTATTTTGAGAATCGGAAGCTTCAGTTGACTTCTGATTTTCAGGTTTCGTCGATGACGCCTTTTCTTGAATCGCATCAGACGTTCTTTGCGCAGATTGCAGGTTTCTTTGTGGTGGAGGATCGCGTGTATAGGACTGGTGGTGGTTTGATATCGAAAATGGAAGTTGAGAATCTGTGGGAGATTGCTGTTAGTAAAATGTGTTCTGTGTTGGAGGATCAATTCTCGAGAATGCAAACTGCGAATCATCTTTTGTTAATTAAGGATTATGTGAGTCTGTTAGGAGTGACACTGAGGAGATTTGGTTATCCGATTGATGCATTGCTTGATGTTTTAAGTAAACATAGGGATAAGTATCATGAATTACTCTTGTCGGATTGTAGGCAGCAGATAGCGGAGGCTGTAGCTGGTGATAAGTTTGGGCAGATGGTGATGAAGAAAGAGTATGAGTATTCGATGAATGTGCTTTCTTTTCAGATTCAAACATCGCATATCATGCCTGCTTTTCCTTATGTGGCACCGTTTTCTTCTACGGTGCCTGATTGTTGTCGTATTGTACGGTCATTCATTGAGGATTCTGTTAGTTTCATGTCGTATGGCGGGCAGCTTGAGTTCTATGATGTTGTTAAGAAGTATTTAGATAAGCTTTTGGGTGAGGTTTTAGATGAATCTTTATTAAAGCTTATTAATACTACAGTTAATGGTGTCTTCCAGGCAATGCAAATGGCGGCAAATATGGCTGTTATGGAGCGTGCATGTGATTTTTTCTTTCGCCATGCAGCACAGCTTTCAGGGGTTCCGTTAAGAATGGTGGAGAGAAGCAGGAGGCAGTTCCCTCTGAGAAAAGCCCGTGATGCTGCGGAAGAGACGCTTGCTCGGCTACTAAAATCCAAAGTTGATGGATATATGACCTTGATTGAGAATGTAAATTGGATGACTGATGATCCACCTCAAGGTGGAAATGAATATGTAAACGAGGTCATTATTTATTTGGAAACTTCGTTTTCTAATGCATCACAGATTTTGCCAACTCAAGTCCTTAAAAGAGTTATACCGGATGTTCTTTCTCACATATCGGATTCGATTGTTGGGACTCTAGTTAGTGATTCCGTTAAGAGATTTAGTGTCAGTGCCGTTACTGGAATTGATACAGACGTCAAGCTCTTAGAATCATTTGCTGAAAATCAGGCCGTCCTTTTCTTTGATGGAGATGCTGATAAGTTGAAATCAGCCCTTGCGGAGTCGAGACAAATGGTCAATTTGCTGGTAAGCAATCATCCGGAGAATTTCCTGAACCCAGTGATCAGGGAGAGGAGTTATAGTGCTTTAGACCACAAGAAAGTGGTGATTGTTTCAGAGAAGCTAAAGGATCCTTCGGACCGACTCTTTGGAACCTTTGGTAGCCGAGGGTCCAGGCAGAATCCAAAAAAGAAATCACTGGATACATTGATAAAAAGACTAAGGGATGTTAGTTGA 2418 0.4491 MNPSKPPRRKVIQANGDDSGDKQDQLLLSSAICNNEDLGPFIRKAFASGKPETLQHHLKHFSRSKESEIEEVCKAHYQDFILAVDDLRSLLSEVESLKSSLSDSNSKLQSVARPLLTSLDSFVETRNVSRNVSLAVESVGACVQLMEVCSRANSHLAGDNFYMALKCVDAIERDYLDKTSSSTLKKMLEKKIPEIRSYIERKVNKEFGDWLVEIRVVSRNLGQLAIGQASSARQREEDLRIKQRQAEEQSRLSVRDCIYALEEEDEDGVAAGIGDEGHSNGNGNSGGVLGFDLTPLYRAYHIHQTLGLEDGFKQYYFENRKLQLTSDFQVSSMTPFLESHQTFFAQIAGFFVVEDRVYRTGGGLISKMEVENLWEIAVSKMCSVLEDQFSRMQTANHLLLIKDYVSLLGVTLRRFGYPIDALLDVLSKHRDKYHELLLSDCRQQIAEAVAGDKFGQMVMKKEYEYSMNVLSFQIQTSHIMPAFPYVAPFSSTVPDCCRIVRSFIEDSVSFMSYGGQLEFYDVVKKYLDKLLGEVLDESLLKLINTTVNGVFQAMQMAANMAVMERACDFFFRHAAQLSGVPLRMVERSRRQFPLRKARDAAEETLARLLKSKVDGYMTLIENVNWMTDDPPQGGNEYVNEVIIYLETSFSNASQILPTQVLKRVIPDVLSHISDSIVGTLVSDSVKRFSVSAVTGIDTDVKLLESFAENQAVLFFDGDADKLKSALAESRQMVNLLVSNHPENFLNPVIRERSYSALDHKKVVIVSEKLKDPSDRLFGTFGSRGSRQNPKKKSLDTLIKRLRDVS 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05419 805 Pfam Exocyst complex subunit Sec15-like 465 769 IPR046361 -
Vivi6g05419 805 FunFam Exocyst complex component 419 587 - -
Vivi6g05419 805 PANTHER SEC15 14 803 IPR007225 GO:0006886|GO:0090522
Vivi6g05419 805 MobiDBLite consensus disorder prediction 1 22 - -
Vivi6g05419 805 FunFam Exocyst complex component 597 744 - -
Vivi6g05419 805 Gene3D Dsl1p vesicle tethering complex, Tip20p subunit, domain D 597 744 IPR042044 -
Vivi6g05419 805 Gene3D - 419 591 IPR042045 -
Vivi6g05419 805 Coils Coil 229 249 - -
Vivi6g05419 805 PIRSF Sec15 3 805 IPR007225 GO:0006886|GO:0090522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05419 Vivi-Chr6 159683996 159686662 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05419 K19985 - gmx:100796432 1325.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05419 6 159683996 159686662 Vivi6g05419 6 159683996 159686662 ECH