Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05412 ATGGCAAAAATCTTCTCGGTTTTGGTTATCTGCGTAATTGTATTTGCTCACCAAACTTCCGCAGAGATTCTTAAAGGCAACGCCTTAATAAAAAACGTATGCAATCTATCACCAAACAGCAAAGATCTCTGCGTGGAAATTCTTTCTTCCGACCCAACAAAATCACCAAACGCCGATCTCAAAGACCTAGCAATCGTAGCCCTAAGAGTTGCTGCAAACAACGCTTCAGCAATCTTGACCGACGTGAAGATGTTGATCGACGACGCTAATCTAGACCCTGAAATTCAACAAGGTTTGGCTGATTGTAAGGAGACTATATTGGACGCTGAATCTCAGCTCGAAGACACCATTGCTGCATTGTTGATTGAATCTGATGTTGATGCTCAGAAATGGTTGAAGGCTGCTTTGGCTGCTATTACAACATGCGATGATTCTATTCCCGGCAATGATGATGTTTTGTCTGTCAAGAGTCACACTTTCCGCAAATTGTGCAACATTGTTGTTGTTATTACCAGGGCTATGCCTGCTTCACGCATCTTATAA 543 0.4236 MAKIFSVLVICVIVFAHQTSAEILKGNALIKNVCNLSPNSKDLCVEILSSDPTKSPNADLKDLAIVALRVAANNASAILTDVKMLIDDANLDPEIQQGLADCKETILDAESQLEDTIAALLIESDVDAQKWLKAALAAITTCDDSIPGNDDVLSVKSHTFRKLCNIVVVITRAMPASRIL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05412 180 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 174 IPR035513 -
Vivi6g05412 180 SMART PMEI_2 25 170 IPR006501 GO:0004857
Vivi6g05412 180 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 174 IPR035513 -
Vivi6g05412 180 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 165 - -
Vivi6g05412 180 Pfam Plant invertase/pectin methylesterase inhibitor 29 167 IPR006501 GO:0004857
Vivi6g05412 180 NCBIfam pectinesterase inhibitor domain 5 172 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05412 Vivi-Chr6 159585043 159585895 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05412 - - gmx:102667060 241.506