Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05407 ATGTCTACGCACCCTAAGTTTACTCGAGTTCCCAGTATCAGAGACAGAGTTCAAGATACTCTCTCTGCGCATCGGAACCAACTCATTTCTCTTCTCTCCAGGTATGTTGCTCAAGGGAAAGGGATTTTGCAACCGCATAATTTGATTGATGAACTTGATAATATACTTGGCGAGGATCATGCATCACTGGATCTTAAAAATGGTCCATTTGGACAAATTATCAACTCTGCACAGGAAGCCATAGTTTTGCCTCCTTTTGTGGCCATAGCAGTTCGTCCCAGACCAGGTGTTTGGGAATATGTCCGTGTTAATGTCTTTGAACTCAGTGTGGAGCAGTTGAGTGTTTCTGAATATCTCAGTTTCAAAGAAGAACTTGTAGAAGGAAAGAGTAATAATAATCTTATGTTGGAGCTTGACCTTGAGCCATTTAATGCATCATTTCCACGTCCAACTCGCTCATCTTCGATTGGAAATGGTGTGCAGTTTCTCAACCGCCACCTCTCGTCAAATATGTTTCGTAACAAAGATTGCTTGGAACCCTTGCTTGATTTCCTCCGTGTTCATACATATAAAGGCCATGCACTGATGTTAAATGATAGAATACAAAGCATTTCCAAACTTCAGTCTGCTTTGGTCAAGGCCGAGGATCATCTTTCTAAGCTTGCACCTGATACACTCTATTCTGAGTTTGAATATGAATTACAAGGAATGGGATTCGAGAGAGGTTGGGGTGATACTGCTGCTCGGGTTTTAGAGATGATGCATCTTCTACTGGATATTCTTCAGGCCCCTGATCCTTCTACACTGGAGACTTTTCTTGGAAGAGTGCCTATGGTGTTCAATGTTGTTATATTGTCTCCACATGGTTTCTTTGGGCAAGCCAATGTCCTCGGTTTGCCTGACACTGGTGGCCAGGTTGTTTATATACTAGATCAAGTGCGTGCCCTTGAGAGTGAGATGCTCGTTCGGATCAAGAAACAAGGACTTGATTTCACTCCTAGAATTCTAATTGTTACTAGGTTAATACCTGATGCAAAGGGAACGACATGCAACCAGCGACTAGAAAGAGTCAGTGGCACTGAATACACACATATTTTGCGTGTTCCATTCCGGTCAGAAAAAGGAATTCTTCGTAAATGGATCTCAAGGTTTGATGTCTGGCCTTTCCTGGAAACTTTTGCAGAGGATGTTGCTAGTGAAATTACTGCTGAGTTACAATGTTATCCTGATTTCATCATAGGAAACTACAGTGATGGAAATCTTGTTGCATCTTTATTGGCTTACAAAATGGGAGTTACCCAGTGTACAATCGCGCATGCACTGGAGAAGACAAAATATCCAGATTCAGATATATATTGGAAGAAATTCGAAGATAAATACCATTTTTCTTGTCAGTTCACTGCCGATCTAATAGCCATGAACAATGCTGATTTTATCATCACCAGTACATATCAAGAGATTGCTGGAACGAAGAATACTGTTGGCCAGTATGAGAGTCACACTGCTTTTACTCTTCCGGGATTGTATAGAGTTGTCCACGGCATTGATGTTTTTGATCCCAAGTTCAACATTGTCTCTCCTGGAGCAGATATGACAATATATTTCCCCTACTCTGATAAGGAGAAAAGACTCACCGCCCTACACAGTTCAATTGAAAATCTATTGTACGATACCGAGCAGACCGATGACTACATCGGTTCACTGACAGACCGGTCAAAGCCTATAATTTTCTCCATGGCAAGGCTAGACAGAGTTAAAAATATAACTGGTTTGGTAGAAAGCTATGCTAAGAACAGCAAGTTGAGGGAACTTGTCAACCTTGTTGTAGTAGCTGGTTATATCGATGTCAAAAAGTCCAGTGACAGAGAAGAAATTGCAGAGATTGAGAAGATGCATGATCTCATGAAGCAATACGATTTGAATGGTGAGTTTCGGTGGATTACTGCCCAAACAAATAGAGCACGTAACGGGGAGCTATATCGCTACATAGCAGATACAAAAGGAGCTTTTGTTCAGCCTGCTTTCTATGAAGCTTTTGGACTTACAGTTGTGGAGGCCATGACATGTGGGCTCCCAACGTTCGCTACTAGCCATGGTGGTCCTGCTGAGATCATCGAGCATGGTGTATCGGGATTCCATATTGATCCTTATCATCCTGACCAAGCATCAGAGCTATTGGTTGAATTTTTCCAACGATGTAAGGAGGATCCAAATCACTGGAATAAAATATCTGATGGTGGCCTTCAAAGAATTTACGAAAGGTACACATGGAAGATCTATTCTGAAAGGCTTATGACCTTGGCTGGAGTTTATAGTTTCTGGAAATATGTTTCCAAACTAGAGAGACGGGAAACTCGACGATATCTTGAGATGTTCTACATTCTTAAGTTCCGTGATTTGGCAAATTCTGTTCCAATAGCAAAGGATGATGCAAATTAA 2439 0.4149 MSTHPKFTRVPSIRDRVQDTLSAHRNQLISLLSRYVAQGKGILQPHNLIDELDNILGEDHASLDLKNGPFGQIINSAQEAIVLPPFVAIAVRPRPGVWEYVRVNVFELSVEQLSVSEYLSFKEELVEGKSNNNLMLELDLEPFNASFPRPTRSSSIGNGVQFLNRHLSSNMFRNKDCLEPLLDFLRVHTYKGHALMLNDRIQSISKLQSALVKAEDHLSKLAPDTLYSEFEYELQGMGFERGWGDTAARVLEMMHLLLDILQAPDPSTLETFLGRVPMVFNVVILSPHGFFGQANVLGLPDTGGQVVYILDQVRALESEMLVRIKKQGLDFTPRILIVTRLIPDAKGTTCNQRLERVSGTEYTHILRVPFRSEKGILRKWISRFDVWPFLETFAEDVASEITAELQCYPDFIIGNYSDGNLVASLLAYKMGVTQCTIAHALEKTKYPDSDIYWKKFEDKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKEKRLTALHSSIENLLYDTEQTDDYIGSLTDRSKPIIFSMARLDRVKNITGLVESYAKNSKLRELVNLVVVAGYIDVKKSSDREEIAEIEKMHDLMKQYDLNGEFRWITAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATSHGGPAEIIEHGVSGFHIDPYHPDQASELLVEFFQRCKEDPNHWNKISDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIAKDDAN 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05407 812 Gene3D Glycogen Phosphorylase B; 530 757 - -
Vivi6g05407 812 Pfam Sucrose synthase 9 556 IPR000368 GO:0005985|GO:0016157
Vivi6g05407 812 FunFam Sucrose synthase 12 148 - -
Vivi6g05407 812 Gene3D Glycogen Phosphorylase B; 283 800 - -
Vivi6g05407 812 FunFam Sucrose synthase 283 566 - -
Vivi6g05407 812 Pfam Glycosyl transferases group 1 570 742 IPR001296 GO:0016757
Vivi6g05407 812 PANTHER - 7 809 IPR012820 GO:0005985|GO:0016157
Vivi6g05407 812 FunFam Sucrose synthase 149 278 - -
Vivi6g05407 812 Gene3D - 12 148 - -
Vivi6g05407 812 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 298 766 - -
Vivi6g05407 812 NCBIfam sucrose synthase 25 806 IPR012820 GO:0005985|GO:0016157
Vivi6g05407 812 Gene3D - 149 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05407 Vivi-Chr6 159480016 159486343 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g05407 3 810 Glycosyltransferase AT4G02280 82.921 0.0 1434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05407 K00695 - gmx:100793371 1484.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05407 6 159480016 159486343 Vivi6g05407 6 159480016 159486343 ECH