Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05181 ATGTATATGGCAACATTGGGTGCAAACTCAAGTATTATTATTAAAACTGATTTAAGGTTTCACAGATCAATAACAACAACAACAACTTCAAGGTTTCAGTATTCTCCTACTTGTACTGTGGCACTTCTCAAACTAGTGTCTTTCACTAGAAAACCTCTTCATCATTCTCGCGGTTTAGGATGGCAATGTCAACACCACAAAGGGGAACACCATTCTTCTCCCAATCCTGCACAGATATTAGAAATTGGGTTCAATAGGATGGTTGTTTCTCTTCAAGATTGGAGAAATTTACGCGTCATGGAACTAGCTGGCTTGTTGCTTTGTATTTTAATGGTTGTTCCATCAGCTGATGCTGTTGATGCTCTCAAAACTTGTGCCTGTTTGCTCAAGGAATGCAGGCCAGAATTAGCCAAGTGTCTTTCAAACCCATCATGTGCTGCCAATATTGCTTGTCTCCAAACTTGCAACAATAGACCTGATGAAACTGAATGCCAGATAAAATGCGGAGACGTGTTTGAAAACAGTGTGGTTGATGAATTCAACGAGTGTGCCGTCTCAAGGAAGAAATGTGTACCTAAGAAATCTGATGTGGGAGAGTTTCCTGTTCCAAATCCGGATGTCCTTGTCAAGAGCTTTAATATTTCAGATTTTAGTGGCAAGTGGTACATCACTAGTGGATTAAATCCCACTTTTGATGCCTTTGACTGCCAGTTACATGAATTTCGCACAGAAGCCAATAAACTTGTTGGTAATATAACATGGAGAATACCAACTCCAGATGGTGGATTTCTTACCAGGTCAGCCCTGCAGAAATTTGTTCAAGATCCTGAAAATCCAGGAATACTCTACAATCATGATAACGAGTACCTTAACTATCAAGATGACTGGTATATTTTGTCATCTCAAATTGAGAACAAACCAGATGACTATATATTCATCTACTACCGAGGAAGAAACGATGCATGGGATGGCTATGGTGGTGCTGTCGTATACACAAGGAGTTCAGTTTTACCCGAATCCATTGTTCCTGAACTTGAAAAAACGGCAAAGAGTGTAGGAAGAGACTTCAGCAAGTTCATTAGAACCGATAACACATGTGGACCAGAGCCTTCGATTGTGGAGAGGCTGGAGAAAAAAGTAGAGGAAGGAGAGAAAACCATTGTGAGGGAAGTTGAAGAGTTGGAAGAAGAGGTAGAGAAGGTTGGGAAAACCGAAATGAACTTGTTACAGAAGTTGGCAGAAGGGTTCAAAATTTTTCAAGAAGATGAAGAAAATTTCTTAAGAGGGCTATCTAAGGAAGAAATGGAGATACTCAACAGCCTCAAATTGGAAGCTGATGAAGTAGAAAAGCTCTTTGGACGTGCCTTGCCACTGAGGAAACTAAGATAA 1389 0.4024 MYMATLGANSSIIIKTDLRFHRSITTTTTSRFQYSPTCTVALLKLVSFTRKPLHHSRGLGWQCQHHKGEHHSSPNPAQILEIGFNRMVVSLQDWRNLRVMELAGLLLCILMVVPSADAVDALKTCACLLKECRPELAKCLSNPSCAANIACLQTCNNRPDETECQIKCGDVFENSVVDEFNECAVSRKKCVPKKSDVGEFPVPNPDVLVKSFNISDFSGKWYITSGLNPTFDAFDCQLHEFRTEANKLVGNITWRIPTPDGGFLTRSALQKFVQDPENPGILYNHDNEYLNYQDDWYILSSQIENKPDDYIFIYYRGRNDAWDGYGGAVVYTRSSVLPESIVPELEKTAKSVGRDFSKFIRTDNTCGPEPSIVERLEKKVEEGEKTIVREVEELEEEVEKVGKTEMNLLQKLAEGFKIFQEDEENFLRGLSKEEMEILNSLKLEADEVEKLFGRALPLRKLR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05181 462 ProSitePatterns Lipocalin signature. 213 224 IPR022272 -
Vivi6g05181 462 Pfam VDE lipocalin domain 124 364 IPR010788 GO:0046422
Vivi6g05181 462 SUPERFAMILY Lipocalins 201 370 IPR012674 -
Vivi6g05181 462 CDD lipocalin_VDE 196 370 - -
Vivi6g05181 462 PANTHER VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATED 70 451 IPR044682 GO:0010028|GO:0046422
Vivi6g05181 462 Gene3D - 195 377 IPR012674 -
Vivi6g05181 462 Coils Coil 373 411 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05181 K09839 - gmx:100816085 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05181 6 156225759 156229230 Vivi6g05181 6 156225759 156229230 ECH