Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g05164 ATGGCAGTACCCGTTGAAGAAGCCATTGCAGCTCTCTCCACATTCTCGCTCGAGGATGAACAACCAGAGGTGCAAGGACCTGGAGTATGGGTGTCAACTGAGAGAGGTGCAACAGAGAGTCCAATAGAATATTGTGATGTTGCTGCATACAGACTATCTCTGTCAGAGGATACGAAGGCTCTCAATCAGCTGAATTCTCTTACCCAAGAGGGAAAGGAGATGGCATCAGTGCTTTACACATATCGTAGTTGTGTCAAAGCACTTCCTCAGCTTCCTGATTCTATGAAGCAAAGTCAAGCTGACTTATATTTGGAAACATATCAAGTTCTGGATTTGGAAATGAGTCGTTTGCGTGAAATTCAGCGATGGCAAGCTTCAGCTTCCTCAAAACTAGCTGCTGATATGCAACGTTTTTCTAGGCCTGAGCGGCGCATTAATGGCCCTACGATATCTCATCTTTGGTCTATGTTGAAGTTGTTTGATGTTCTAGTGCAACTTGACCATCTAAAAAATGCTAAGGCAAGCATACCTAATGACTTTTCATGGTACAAAAGGACTTTCACACAAGTTAGCGGTCAGTGGCAGGACACCGATTCAATGAGGGAGGAGTTAGATGATTTACAGATTTTTTTGAGCACAAGATGGGCTATTTTGTTGAATTTGCATGTTGAGATGTTCCGTGTAAATAATGTTGAAGACATTCTTCAAGTTCTTATAGTATTTGTTGTAGAGTCCTTGGAGTTGGACTTTGCACTTCTCTTTCCAGAACGCCACATTCTTTTGCGTGTTTTACCTGTTCTTGTTGTCCTAGTGACATCTTCAGAGAAAGATAGCGAGTCTCTGTACAAGAGGGTAAAAATCAACAGACTGATCAATATATTTAAGAACGAATCAGTCATTCCTGCTTTTCCAGATCTGCATCTCTCTCCAGCTGCGATATTGAAGGAATTATCAACATACTTCCCAAAATTTTCTTCCCAAGCTCGCCTTCTCACCCTTCCAGCACCACATGAGCTTCCACCCCGCGAATCACAAGAGTATCAGAGACATTACCTAATTGTCAATCATATTGGAGCCATTCGTGCTGAGCATGATGATTTCACAATTCGTTTTGCTTCAGCAATGAATCAGCTGTTGTTGTTGAAGTCCACCGATGGTTCTGATGTTGATTGGAGCAAAGAGGTCAAAGGGAATATGTATGATATGGTTGTTGAAGGTTTTCAGCTATTAAGCAGATGGACTGCACGCATTTGGGAACAATGTGCATGGAAATTTTCTCGACCATGCAAGGATGCATCCCCATCATTCTCTGACTATGAAAAGGTTGTACGATATAACTACAGTGCAGAGGAAAGGAAAGCACTGGTCGAACTTGTGAGCTACATAAAGAGTGTTGGTTCTATGATGCAGCGGTGTGATACACTGGTTGCCGATGCTTTATGGGAAACAATACATGCCGAGGTCCAAGATTTTGTTCAAAACACATTAGCTTCTATGTTGCGGACAACCTTCAGAAAGAAGAAGGATCTCTCTAGGATTCTTTCTGATATGAGGACCCTTTCAGCTGATTGGATGGCTAATACAACTAAGTCAGAATCTGAGCTACAGTCCTCACAGCATGGAGGTGAAGAAAGCAAAGCAAACATATTTTATCCAAGGGCAGTTGCCCCAACTACTGCTCAGGTGCACTGTTTGCAGTTCTTAATATATGAGGTGGTTTCTGGTGGTAACCTTAGGAGACCCGGTGGACTTTTTGGCAATAGTGGCTCAGAAATCCCAGTTAATGATTTAAAACAGCTGGAGACGTTTTTTTACAAGCTTGGTTTTTTCCTGCATATTTTAGACTACTCAGTGACTGTTGCCACATTGACAGATCTTGGTTTCTTATGGTTTAGAGAATTTTATTTAGAGTCTTCACGAGTCATTCAGTTTCCAATCGAATGCTCTCTTCCCTGGATGTTGGTGGATTGTGTACTTGAGTCGCCAAACTCTGGTCTTCTTGAGAGTGTTCTGATGCCATTTGACATCTATAATGATTCAGCTCAGCAAGCCTTAGTGTTGCTGAAACAACGGTTTCTGTACGATGAAATTGAGGCTGAGGTGGATCACTGTTTTGACATATTTGTTTCCAGATTGTGTGAAGCCATTTTCACGTATTACAAAAGTTGGGCAGCAAGTGAACTGCTTGATCCTACATTTATCTTTGCCTCAGACAATGCAGAAAAGTATGCTGTGCAGCCTATAAGACTCAATATGCTGCTAAAAATGACTCGAGTGAAGCTACTTGGAAGGATGATCAACTTGCGAAGTTTGATGTCTGAACGGATAAATAAAATTTTCCGTGAAAATATTGAGTTTCTGTTTGATCGTTTTGAGTGTCAAGATCTGTGTGCCATAGTGGAATTAGAGAAGTTGTTGGATGTCTTAAAACATTCCCATGAACTACTGTCAAGAGATCTTTCTGTTGACTCTTTTAGTCTTATGTTGAATGAGATGCAAGAGAACATCTCCCTCGTGTCATTTTCTAGTCGACTGGCCTCACAGATTTGGTCTGAGATGCAAAGTGATTTTTTGCCAAGTTTCATCCTCTGCAATACTACTCAACGATTTATCAGATCATCAAAGACAATTCCTGTTCAAAAGCCATCCATACCCTCTGCTAAGCCTAGCTTCTATTGTGGTACTCAAGATTTAAATTCGGCGCATCAAAGTTTTGCTCGACTGCATAGCGGATTCTTTGGAATACCTCACATGTTTTCTATTGTTCGACTTTTGGGATCCCGATCATTACCTTGGCTTATTAGAGCCCTTCTTGACCATATATCAAACAAGATTACTTTGCTGGAACCAATGATAACAGGATTACAAGAATCCATGCCAAAATCAATTGGTCTTCTTCCTTTTGATGGTGGTGTGACAGGTTGTGTACGACTTGTTAAAGAACATCTTAACTGGGAGGCAAAATCAGAGCTGAAAGTTGAGGTTCTTCACGGTATAAAAGAGATTGGAAGTGTATTATACTGGATGGGGCTTCTAGATATTGTGTTGAGAGAAACAGATACTACAAATTTCATGCAAACTGCTCCCTGGCTGGGCTTGCTTCCGGGACCAGATGGACAAATATTACCTTCTCAAGATGGTGGGGATAGCCCTATTGTCAGTCTCTTTAAATCTACGGCTGCTGCAATGGTTTCATATCCTGGTTGTCCATCTCCTAATTCTTTCCACATCATGTCAAAACAAGCAGAAGCTGCAGATCTTTTATATAAGGCTAACTTGAATACTGGAAGTGTTCTGGAGTATGCGCTTGCTTTCACAAGTGCTGCATTAGATAAATATTGTAGTAAATGGAGTGCTGCGCCCAAGACAGGCTTCATTGACATTGCAATTTCAAAAGATTTCTATCGAATATATAGTGGTCTCCAAATTGGATACTTGGAAGAGTCTGCCCAAGTACCATCAAGTAGTCCTGAAAGACTGGGGGATTCAGTCGCGTGGGGGGGCTGCACCATAATTTATTTGCTTGGGCAACAACTGCATTTTGAGCTCTTTGACTTCTCGTACCAGATCCTCAATATTGCAGAAGTGGAAGCTGCCTCTGTTGTGCAAACACACAAGAACGCCCACTTTGCTGCTCAGGGATGGGAAGCCATATTAGAGGCAATGAAAAAAGCAAGAAGATTAAATAACCATGTATTCTCTATGCTTAAAGCTCGCTGCCCCCTTGAAGAAAAGACAGCGTGTGCTATTAAGCAAAGTGGTGCTCCATTACATCGTATAAGATTTGAAAACACAGTTTCAGCGTTTGAAACTCTCCCGCAGAAAGGTGCTTAA 3834 0.4155 MAVPVEEAIAALSTFSLEDEQPEVQGPGVWVSTERGATESPIEYCDVAAYRLSLSEDTKALNQLNSLTQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREIQRWQASASSKLAADMQRFSRPERRINGPTISHLWSMLKLFDVLVQLDHLKNAKASIPNDFSWYKRTFTQVSGQWQDTDSMREELDDLQIFLSTRWAILLNLHVEMFRVNNVEDILQVLIVFVVESLELDFALLFPERHILLRVLPVLVVLVTSSEKDSESLYKRVKINRLINIFKNESVIPAFPDLHLSPAAILKELSTYFPKFSSQARLLTLPAPHELPPRESQEYQRHYLIVNHIGAIRAEHDDFTIRFASAMNQLLLLKSTDGSDVDWSKEVKGNMYDMVVEGFQLLSRWTARIWEQCAWKFSRPCKDASPSFSDYEKVVRYNYSAEERKALVELVSYIKSVGSMMQRCDTLVADALWETIHAEVQDFVQNTLASMLRTTFRKKKDLSRILSDMRTLSADWMANTTKSESELQSSQHGGEESKANIFYPRAVAPTTAQVHCLQFLIYEVVSGGNLRRPGGLFGNSGSEIPVNDLKQLETFFYKLGFFLHILDYSVTVATLTDLGFLWFREFYLESSRVIQFPIECSLPWMLVDCVLESPNSGLLESVLMPFDIYNDSAQQALVLLKQRFLYDEIEAEVDHCFDIFVSRLCEAIFTYYKSWAASELLDPTFIFASDNAEKYAVQPIRLNMLLKMTRVKLLGRMINLRSLMSERINKIFRENIEFLFDRFECQDLCAIVELEKLLDVLKHSHELLSRDLSVDSFSLMLNEMQENISLVSFSSRLASQIWSEMQSDFLPSFILCNTTQRFIRSSKTIPVQKPSIPSAKPSFYCGTQDLNSAHQSFARLHSGFFGIPHMFSIVRLLGSRSLPWLIRALLDHISNKITLLEPMITGLQESMPKSIGLLPFDGGVTGCVRLVKEHLNWEAKSELKVEVLHGIKEIGSVLYWMGLLDIVLRETDTTNFMQTAPWLGLLPGPDGQILPSQDGGDSPIVSLFKSTAAAMVSYPGCPSPNSFHIMSKQAEAADLLYKANLNTGSVLEYALAFTSAALDKYCSKWSAAPKTGFIDIAISKDFYRIYSGLQIGYLEESAQVPSSSPERLGDSVAWGGCTIIYLLGQQLHFELFDFSYQILNIAEVEAASVVQTHKNAHFAAQGWEAILEAMKKARRLNNHVFSMLKARCPLEEKTACAIKQSGAPLHRIRFENTVSAFETLPQKGA 1277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g05164 1277 PANTHER CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED 3 1268 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 PIRSF CYFIP 1 1277 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 134 163 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 436 454 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 690 712 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 748 778 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 257 272 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 623 641 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 PRINTS Cytoplasmic fragile X mental retardation protein interacting protein signature 1133 1149 IPR008081 GO:0030833|GO:0031267
Vivi6g05164 1277 Pfam Cytoplasmic Fragile-X interacting family 399 1236 IPR008081 GO:0030833|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g05164 Vivi-Chr6 156017819 156035604 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g05164 K05749 - gmx:100775991 2433.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g05164 6 156017819 156035604 Vivi6g05164 6 156017819 156035604 ECH