Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04874 ATGGCATCATTGGAAGTGAAATCAGGCTCATTGGTATCTTTACAAGATCTGCGACCATCCTCTCCTTTTTTCAAGCAAGGAACATCACTCAGAATAATTGGAAAGTTACATGAGTACTCTTCAGAGACAGGCCTAGCAACAGTTATCGATGGTAAGGACATTCTAAAAGTTAATACTGAGCATTTGAGGGACCTTAGGTTTCAAGTTGGCTCTGTCTACCAATTCATCGGTGAACTCCTTATCCAACCTGATAACGAGGGAGTTTTGCAAGCACGTGTTGGTAGAAACGTCGATGGGATTGATCTCAACCTTTATCATCAATCTTTGCTGCTTTTGAGACAGTTTCAAGCCAATCATTTGGATAATGCAGCAACTTAA 378 0.4074 MASLEVKSGSLVSLQDLRPSSPFFKQGTSLRIIGKLHEYSSETGLATVIDGKDILKVNTEHLRDLRFQVGSVYQFIGELLIQPDNEGVLQARVGRNVDGIDLNLYHQSLLLLRQFQANHLDNAAT 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04874 125 Gene3D - 7 120 IPR012340 -
Vivi6g04874 125 Pfam Telomere-capping, CST complex subunit 7 118 IPR029146 GO:0003697|GO:1990879
Vivi6g04874 125 FunFam CST complex subunit TEN1 6 122 - -
Vivi6g04874 125 PANTHER CST COMPLEX SUBUNIT TEN1 1 125 IPR029146 GO:0003697|GO:1990879
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04874 Vivi-Chr6 152705024 152708936 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04874 K23313 - gmx:100305519 223.787