Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04865 ATGTATACTTTAAAGATGATAACCATTCCACTCTTTCTACTAATCACTTCTCTTGGTTCACTAATTCATGCAAATCCTCTAACTACTTGTCCAAATTGTGGTGACTTTGAAGTTCCATATCCACTCAGCACTAATGATAACTGTGGTGACAAAAGGTACAAAATTTACTGCAACAATCATACCTTAAAGTTCCTGTCACCAACAGGAACATACTATAACATCCTTAAAATTGACCCAAATGCTAACAAGCTTATAATCAAACCACCTATCATACATAAAAACACTTGTTATTCTTCTGATCTCTTTAATGGAGGCTTAGTACTTGATGAAAATTTACCCTTCAATATTTCTACACTCAACACTGTCATGCTCCTAAACTGCTCTAGTAATATCCTTCAATCTCCTCTTAACTGTTCATCAAACAGCATCTGTAGAGAGTTTGAGGAAAAAGTAGAGGAGGGAAAAGGGTGTATGAACACTCTTTGTTGTCATTACTTGAAAGATTCAGCTATGAATTCTCATAAGATCAGACTCAGAGTTGGAAGTTGTACTGCTTATAGTTGTTTGGTGAATTTCAAACCGGGTGACCCTTTTGAAACTTGGAGTTATGGGATTGAGTTGCAATGGGTGTCTGTGTCTCCTTATTAA 648 0.3596 MYTLKMITIPLFLLITSLGSLIHANPLTTCPNCGDFEVPYPLSTNDNCGDKRYKIYCNNHTLKFLSPTGTYYNILKIDPNANKLIIKPPIIHKNTCYSSDLFNGGLVLDENLPFNISTLNTVMLLNCSSNILQSPLNCSSNSICREFEEKVEEGKGCMNTLCCHYLKDSAMNSHKIRLRVGSCTAYSCLVNFKPGDPFETWSYGIELQWVSVSPY 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04865 215 Pfam Wall-associated receptor kinase galacturonan-binding 30 85 IPR025287 GO:0030247
Vivi6g04865 215 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 9 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04865 Vivi-Chr6 152531313 152532185 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04865 30 210 Receptor kinase-like Gene Family AT5G02070 37.766 1.91e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04865 - - tpra:123890956 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04865 6 152531313 152532185 Vivi6g04865 6 152531313 152532185 ECH