Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04856 ATGAAGACTGGCTCCATGATTTTTTCCTTTTTGCAAGTACCTAGATGCAGAATACACACCTTAGCTAATAATTGGGGTGAAACCTTCCACAGCTTCGGTAACATTTGTCAAAACAATCATAGTGTAAGGTTGTTTGGTTCTAGAATTTATGGACTTCAGGGAGGCCACAGAAAAAAATGGACTCGAAGACCATTAACTACAAATACAGAAAGTTACGCAGACACCAAATCAAGAAGCACCAAGCAAGAAGTTTTGAGCGAAACAGTTTCAACTAGCTCTACAATAAATGTAAATAAAACACAGCTAGGTCAATTTCAGGAAATTCAACAATGTAACATTCAACAGGAGATAGCTCAGAATAAAGACTTGTCTAGCTTAGTCACTGTTATTGTTTTTGATATTGAGACCACCGGGCTTCACCGAGAGAAAGAAAGAATCATTGAGATCGCGCTTCGAGATCTTCAGGGTGGTCCGAACAGCACTTTCCAAACTCTTGTAAATCCTCAATGCTGTGTTGAAAACTCAAGAATCCATGGCATTACTACAAAAATGGTGAACGAGCCCGGTGTTCCGAGAATGGAAGATCTGGCCCCTATATTATTACGCTACGTTCAAAGCCGTGAGAAACCTGGGGGATATGTGTTATGGGTTGCTCATAATGCTCGTACTTTTGATGTACCATTCATCATTAACGAGTTACGTCGATGTTCTACACCGATTCCTCCGAATTGGCTGTTTCTGGATAGTCTTTCTATAGCACGTCAACTAAAGCCTAAAGGAACAAAACTTCCTTCAGTATCCCTTGATGCCCTTAGCAAGTTCTATGAAATTAAAGTTGATGGCTCCGCCCATAGAGCCATGGTAGATGTGAACACATTATCCATGATTCTTCCCAAGTTGACCCGTGATTTGAAATTGACCCTGTCCGCCCTTGTCGAAAGATCGTTCAGAGAAGTTGATATGAAGAAGAAGAATTCAAAATAG 984 0.4055 MKTGSMIFSFLQVPRCRIHTLANNWGETFHSFGNICQNNHSVRLFGSRIYGLQGGHRKKWTRRPLTTNTESYADTKSRSTKQEVLSETVSTSSTINVNKTQLGQFQEIQQCNIQQEIAQNKDLSSLVTVIVFDIETTGLHREKERIIEIALRDLQGGPNSTFQTLVNPQCCVENSRIHGITTKMVNEPGVPRMEDLAPILLRYVQSREKPGGYVLWVAHNARTFDVPFIINELRRCSTPIPPNWLFLDSLSIARQLKPKGTKLPSVSLDALSKFYEIKVDGSAHRAMVDVNTLSMILPKLTRDLKLTLSALVERSFREVDMKKKNSK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04856 327 Pfam Exonuclease 130 293 IPR013520 -
Vivi6g04856 327 SMART exoiiiendus 128 306 IPR013520 -
Vivi6g04856 327 SUPERFAMILY Ribonuclease H-like 128 303 IPR012337 -
Vivi6g04856 327 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 127 310 - -
Vivi6g04856 327 CDD DEDDh 130 297 - -
Vivi6g04856 327 Gene3D - 127 314 IPR036397 GO:0003676
Vivi6g04856 327 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 56 323 IPR040393 GO:0008408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04856 - - gmx:100807346 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04856 6 152454849 152458272 Vivi6g04856 6 152454849 152458272 ECH