Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04833 ATGGCTAGATTGGTGGCATTCCAACAGAATCAACTATCTTTCCCTCCTTTAGCTTCCTCTTTTTCTGATTTCAATGGAACAAGACTTCAAACTCACATTCAGTTGAAAAGAAAAACACGGCAGCCAAAAGCATCTTTTTATGTCTCAGCATCAAGCACAAAGAAAATCCTCATCATGGGAGGTACTAGATTCATTGGTGTGTTTTTGTCTAGACAACTTGTCAAAGAAGGTCACCAGGTAACTTTATTTACAAGAGGAAAAGCACCTATCACTCAACAATTGCCAGGTGAATCAGACACTGATTTTGCTGATTTTTCTTCAAAGATCTTGCATTTGAAAGGAGACAGGAAGGACTATGATTTTGTAAAATCTAGTCTCTCAGCAGAAGGATTTGATGTTGTTTATGACATAAATGGACGAGAGGCGGAAGAAGTTGAGCCAATACTTGATGCTCTCCCTAATCTTGAACAGTTCATTTACTGTTCTTCTGCTGGTGTCTATCTGAAATCTGATTTATTACCTCACGCCGAGATTGATGCAGTTGACCCTAAGAGCAGGCACAAGGGAAAGCTTGAAACAGAGAGTTTGTTGCAATCAAAGGATGTTAATTGGACTTCTATAAGGCCAGTTTACATTTATGGCCCTTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCACCGATTGAAAGCCGGTCGCCCGATTCCTATTCCCGGCTCAGGAATACAGATAACACAACTTGGTCATGTTAAGGATTTGGCGACAGCTTTTTTGAAGGTTCTTGGAAATGATAAAGCCAGCAAGCAGATATTCAACATCTCAGGAGACAAATATGTCACATTTGATGGACTAGCAAGAGCATGTGCTAAGGCCGGTGGGTTCCCTGAACCCGAGCTCATTCACTACAATCCTAAAGACTTTGATTTCGGGAAAAAGAAGTCATTTCCCTTTCGCGACCAGCATTTCTTTGCATCAGTGGAGAAAGCAAAGAGTGTGCTTGGGTTGGAACCTGAATATGGGCTTGTAGAAGGTCTTACAGATTCGTATAACCTCGATTTCGGTAGAGGAACTTTCCGCAAAGAGGCTGATTTTTCAACCGATGATATAATTCTTGGCAAGAGTCTTGTTAATGTATGA 1137 0.4107 MARLVAFQQNQLSFPPLASSFSDFNGTRLQTHIQLKRKTRQPKASFYVSASSTKKILIMGGTRFIGVFLSRQLVKEGHQVTLFTRGKAPITQQLPGESDTDFADFSSKILHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPILDALPNLEQFIYCSSAGVYLKSDLLPHAEIDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATAFLKVLGNDKASKQIFNISGDKYVTFDGLARACAKAGGFPEPELIHYNPKDFDFGKKKSFPFRDQHFFASVEKAKSVLGLEPEYGLVEGLTDSYNLDFGRGTFRKEADFSTDDIILGKSLVNV 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04833 378 PANTHER UDP-GLUCOSE 4-EPIMERASE 53 360 - -
Vivi6g04833 378 FunFam Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic 52 351 - -
Vivi6g04833 378 Gene3D - 51 351 - -
Vivi6g04833 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 53 347 IPR036291 -
Vivi6g04833 378 CDD SDR_a1 54 307 - -
Vivi6g04833 378 Pfam NAD dependent epimerase/dehydratase family 56 273 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04833 Vivi-Chr6 152192418 152194728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04833 - - gmx:100791076 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04833 6 152192418 152194728 Vivi6g04833 6 152192418 152194728 ECH