Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04829 ATGAGTTTGAGTGTGGCATTCTCAATCTCACTTCTATGGATATCTATCTTCTCTTCTTCTTCTTCTTATTCTTCAGTAGCTGCTGTTACATTGAGTGGTGGATGCAATAAACCTGCGATTCTATTCGTGTTCGGAGATTCGAACTCGGACACGGGTGGACTCGTTTCTGGACTTGGTTTTCCGGTGAATCTTCCCAATGGTCGGACCTTTTTTCACAGATCCACTGGTCGGTTGTCCGATGGACGATTAGTCATCGATTTTCTCTGCCAAAGTTTGAATACAAGATTTTTGACACCATACTTGGACTCCTTGTCTGGATCAACATTCACAAATGGAGCAAGCTTTGCAGTGGTCGGATCCTCTACCCTCCCAAAATATGTTCCTTTCGCTTTGAATATTCAGGTCATGCAGTTCCAGCATTTCAAAGCTCGTAGCCTTCAACTCGCTACCTCAGGTGCAAAAAATATGATCAACGAAGAAGGCTTCCGCGGTGCACTTTACTTGATTGATATTGGGCAAAATGACCTTGCTGATTCATTTACCAAAAATCTATCATATGCGCAAGTCGTCAAGAAGATCCCAACAGTTATCGCTGAAATTGAGAATGCTGTTAAGAGTTTGTATAATGAAGGTGGCAGGAAATTTTGGCTTCACAATACCGGACCCTTTGGCTGTCTTCCTAAATTAATCGCACTGTCTGACAAGAAAGACCTCGATTCATTTGGATGTCTTTCTAGTTACAATTCCGCTGCAAGATTGTTTAACGAAGCACTGTATCATTCGAGCCAGAAAATAAGAACTGAATTGAAGGATGCTACGTTGGTTTATGTTGATATTTATGCCATTAAGATTGATCTCATCGCAAATGCCGCCAAATATGGTTTCACGAATCCGTTGATGGTATGCTGCGGCTACGGAGGACCACCTTATAATTTCGACGTAAGAGTGACATGTGGTCAACCTGGTTATCAGGTTTGCGATGAAGGAACACGGCATGTGAGTTGGGATGGAATCCATTACACCGAGGCTGCAAATACATGGATAGCTTCTAAAATACTTTCGACGGCTTATTCCACGCCACGGACACCTTTTGGTTTCTTCTGCAGCCACTGA 1113 0.4286 MSLSVAFSISLLWISIFSSSSSYSSVAAVTLSGGCNKPAILFVFGDSNSDTGGLVSGLGFPVNLPNGRTFFHRSTGRLSDGRLVIDFLCQSLNTRFLTPYLDSLSGSTFTNGASFAVVGSSTLPKYVPFALNIQVMQFQHFKARSLQLATSGAKNMINEEGFRGALYLIDIGQNDLADSFTKNLSYAQVVKKIPTVIAEIENAVKSLYNEGGRKFWLHNTGPFGCLPKLIALSDKKDLDSFGCLSSYNSAARLFNEALYHSSQKIRTELKDATLVYVDIYAIKIDLIANAAKYGFTNPLMVCCGYGGPPYNFDVRVTCGQPGYQVCDEGTRHVSWDGIHYTEAANTWIASKILSTAYSTPRTPFGFFCSH 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04829 370 Gene3D SGNH hydrolase 39 358 IPR036514 -
Vivi6g04829 370 FunFam GDSL esterase/lipase At1g09390 28 357 - -
Vivi6g04829 370 Pfam GDSL-like Lipase/Acylhydrolase 41 352 IPR001087 GO:0016788
Vivi6g04829 370 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 19 353 - -
Vivi6g04829 370 CDD SGNH_plant_lipase_like 38 354 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04829 Vivi-Chr6 152090114 152092627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04829 41 352 Acyl Lipid Metabolism Gene Families AT4G10950 27.134 4.10e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04829 - - gmx:100797617 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04829 6 152090114 152092627 Vivi6g04829 6 152090114 152092627 ECH