Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04778 ATGAGCAGAAGTAGAAGCAGCAGCAAAGCCACCATGAACACCACCCCTAACGGAACCGAAACCTCTAACCCTCCACCACCCACTTCCCTTGATCTATGGTCACAAATCGTCGCCGGTGAAACCCAAAACCCCGGCAACCAAATTGACGTCGTTTTTCGCAGAAGAAAGCCTCGCAACGACTCTAACAATGCCAACTCAATGGTTTCCGATGATGTTACCCGGCGTCCGAGTCGGGTGAGTTTTGCTGACCCAAATAAGCGAATTAGTTGGAAACGCTCTCTCTCTACCAGAGGGAGAATAAGTATAGCTGTTGGTTCTTCTATGGTTTATCAGCCTGAGCTAAAGAAGGATAAAAGAAAAGGCAAACCACCTGCTGTTCCCAAAGGTAAGAATGTTAAAGCTCCCAACTTTGACAAGGAAAGATTATACTTTCAAGAGGTTGATGCTTTTGAGTTGATGGAGGAGAGTCCCTCTCCGAAGAAAGCTGGCACATGGGTTGTAGGCAATAATATGGAAGAGGTCCCATTACCAACACTATGCTCTAGGTTGGAAAGATGGTTACATTCCAGAAGATTAAACCCCAGATGTGGTCCCTCAAGCACACTATCCAAAATCCTTGATACGCCAACAATGAATTTAGAAGTTAGATTGAGATCGGTGGATCAAAGTGGGCTAAACAATTTACAATTGAGTAACTTTAAATCTGGAGAAAGTAATAGAAGTTTAAACAATGTGAGTCTTATTGAGAGTGAAGGTTGTGAAGAAGATATAGAAGCTGGTGTAAAGAAACTTTCTCTGACTTCAACAACATCCTCAATATATGATGACCAAAATAATCCATTTTCTGTTCTATTAGAAATTTGTGGGCAGTCCGCACCTTCCTTGTTACAAGATTTGTTCTCTAGGTATAGTGGTTCTGAAACTGTTGTGAAAGTTGGCGAAGGAACATATGGAGAAGCTTTCAAGGTTGGGAATTGTGTATGCAAAATAGTTCCTTTTGATGGGGATCTTAGAGTGAATGGAGAAATCCAAAAGAAATCAGAAGAATTGCTGGAGGAGGTGCTTCTTTCCAAAACTCTGAATCAATTGAGAGGAAGTGATGGAGTTTCTAATAATAATCTATGCAGAACATTCATAGAATCCAAAGAATTTAGAGTATGCCAAGGTCTATATGATGAGGTTCTGGTTCGAGCATGGGAAGAGTGGGATCACAAGCATAATTCAGAGAATGATCACCCAAATGAGTTCCCTGAGCAACAGTGTTACATGGTCTTTGTGCAACAACACGGCGGCAAGGATCTTGAAGGTTTTGTGCTCCTTAATTTCAATGAGGCAAGGACTTTGCTTGTTCAGGTTGCAGCCGGGCTTGCTGTGGCTGAGTCTGCCTTTGAATTTGAACATCGAGATCTTCACTGGGGAAATATACTTGTCAGTCGAAGTGATGATTCAGCAACGTTGCAGTTCACTCTTGATGGAAAAAACTTATTAGTCAAAACATATGGATTGATAATATCTATTATTGACTTTACGCTATCTAGAATGAACACTGGTGACAGCATACTGTACTTAGATCTTTCCGCCGATCCCGACCTATTTAAAGGGCCAAAAGGAGACAAACAGTCAGAAACATATCGGAAAATGAAGGAAGTGACTGAAGATTGGTGGGAAGGAAGTTTTCCTAAAACAAATGTGTTGTGGTTGGTCTACTTGGTAGATATACTACTGACGAAGAAAACATTTGAACGTACTTCGAAGGACGAGAGAGAACTACGGTCGTTGAGGAAACGTCTGGACAAGTATAATTCAGCCAAGGAAGCAGTTTTTGATCCTTTCTTCACTGAATTGTTTGTTGAGTCAAACCCAATGGCTTAA 1872 0.414 MSRSRSSSKATMNTTPNGTETSNPPPPTSLDLWSQIVAGETQNPGNQIDVVFRRRKPRNDSNNANSMVSDDVTRRPSRVSFADPNKRISWKRSLSTRGRISIAVGSSMVYQPELKKDKRKGKPPAVPKGKNVKAPNFDKERLYFQEVDAFELMEESPSPKKAGTWVVGNNMEEVPLPTLCSRLERWLHSRRLNPRCGPSSTLSKILDTPTMNLEVRLRSVDQSGLNNLQLSNFKSGESNRSLNNVSLIESEGCEEDIEAGVKKLSLTSTTSSIYDDQNNPFSVLLEICGQSAPSLLQDLFSRYSGSETVVKVGEGTYGEAFKVGNCVCKIVPFDGDLRVNGEIQKKSEELLEEVLLSKTLNQLRGSDGVSNNNLCRTFIESKEFRVCQGLYDEVLVRAWEEWDHKHNSENDHPNEFPEQQCYMVFVQQHGGKDLEGFVLLNFNEARTLLVQVAAGLAVAESAFEFEHRDLHWGNILVSRSDDSATLQFTLDGKNLLVKTYGLIISIIDFTLSRMNTGDSILYLDLSADPDLFKGPKGDKQSETYRKMKEVTEDWWEGSFPKTNVLWLVYLVDILLTKKTFERTSKDERELRSLRKRLDKYNSAKEAVFDPFFTELFVESNPMA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04778 623 ProSiteProfiles Protein kinase domain profile. 306 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g04778 623 SUPERFAMILY Protein kinase-like (PK-like) 310 518 IPR011009 -
Vivi6g04778 623 Gene3D Phosphorylase Kinase; domain 1 297 428 - -
Vivi6g04778 623 PANTHER INTERLEUKIN-1 RECEPTOR-ASSOCIATED KINASE 198 615 - -
Vivi6g04778 623 Pfam Haspin like kinase domain 264 606 - -
Vivi6g04778 623 FunFam serine/threonine-protein kinase haspin 430 614 - -
Vivi6g04778 623 SMART DUF3635_2 529 612 IPR024604 -
Vivi6g04778 623 MobiDBLite consensus disorder prediction 1 80 - -
Vivi6g04778 623 MobiDBLite consensus disorder prediction 1 48 - -
Vivi6g04778 623 MobiDBLite consensus disorder prediction 113 133 - -
Vivi6g04778 623 FunFam Serine/threonine-protein kinase haspin-like protein 293 429 - -
Vivi6g04778 623 Coils Coil 583 603 - -
Vivi6g04778 623 Gene3D Transferase(Phosphotransferase) domain 1 430 613 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04778 K16315 - gmx:100790036 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04778 6 151143081 151147935 Vivi6g04778 6 151143081 151147935 ECH