Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04734 ATGCTGCGACTAAAAGCGTTTCGTCCTTCCACCGATAAAATCGTTAAGATCCAATTACATCCGACGCATCCATGGATGGTAACTGCCGATGATTCAGATCGAGTATCTGTTTGGAACTGGGAGCACCGTCAGGTGATATATGAGTTGAAAGCTGGCGGAGTCGATGAACGACGGTTAGTTGGTGCAAAATTGGAGAAATTGGCTGAGGGAGAAACAGAGTCTAAAGGGAAACCAACAGAAGCTATTCGTGGAGGAAGTGTTAAGCAGGTGAATTTTTATGATGACGACGTGCGCTTTTGGCAACTTTGGCATAATCGCTCTGCAGCGGCAGAGGCACCAACAGCTGTCCATACTTCAACTTTCAGTTCTCCCGCCCCATCAACAAAAGGGAGGCATTTTCTTGTTATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACGATGCGTGGCCGCGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTACACTGCATGGAGTTTCTTTATAGATCTGGCGTTGGTGATGGTCCTCTTGTGGCTTTTGGTGCATCTGACGGAGTCATCAGAGTTCTCTCAATGATTACATGGAAGCTTGCGAGAAGATACACTGGAGGTCATAAAGGAACAATCTCTTGCTTGAGGTCCTTCATGGCAGCTTCAGGCGAGGCTCTCCTGGTTTCGGGTGCTAGTGATGGATTGCTCATAATTTGGAGTGCTGATCATGGACAAGATTCACGTGAACTTGTACCCAAGCTGAGTTTAAAAGCTCATGATGGCGGGGTTGTGGCAGTTGAGCTGTCCAGAGTGATGGGAGGTGCTCCTCAACTAATTACAATTGGTGCAGATAAGACATTAGCTATATGGGACACAATCTCCTTTAAGGAGCTGCGGCGTATAAAGCCTGTTCCAAAATTGGCTTGCCACAGTGTGGCTTCTTGGTGCCACCCTCGAGCTCCAAACCTTGATATTTTAACCTGTGTCAAAGATTCTCACATATGGGCAATTGAACATCCCACATATTCTGCTCTCACTAGGCCATTGTGCGAATTGACAACAGTTATTCCTCCACATGCTCTTGCTCCTAATAAAAAACTGAGGGTGTATTGTATGGTTGCACATACGCTGCAGCCACACCTTGTTGCTATTGGAACCAATATTGGTGTTGTCATCTGCGAGTTTGATGCTAGATCTCTTCCACCTGTTGCTCCCCTACCCACCCCACCAGACAGCAGAGAGCATTCTGCTGTATTTGTAATTGAAAGGGAGCTAAAGCTATTAAATTTTCAACTGAACAACTCTGTAAATCCATCCCTCGGAAATAACAGCGCCTTGTCGGAAACAGGAAGATCTCAGGGAGATTCTTTTGAACCACTGTCTGTCAAGCAGGGGAAGAAGCACATTAGCACACCAGTTCCTCACGATTCATACTCTGTTCTTTCTGTGAGCAGTTCTGGAAAGTATTTAGCAATCGTATGGCCAGATATTCCTTATTTCTCTGTCTACAAGGTCAGTGATTGGTCAATTGTTGACTCTGGCAGTGCAAGGCTTCTCGCATGGGATACTTGTCGTGACAGATTTGCTATACTGGAATCAACATTACCTCCCCGAATTCCTATAATTCCCAAGGGTAGTTCATCGAAAAGAGCAAAAGAAGCTGCTGCAGCACAAGCAGCAGCAGCTGCAGCTGCTGCTGGTTCTTCAGCTTCTGTTCAAGTGCGAATTGTGTTAGATGACGGAACATCAAATATACTAATGAGGTCTGTTGGTGCACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTGTTGCCTATCGGACATCTAGAAGAATCAGTCCTATTGCTGCTACTGCTATTTCGACAATCCAGTCTATGCCGTTATCAGGTTATGGAAGCAGTGGTCTTTCTTCTTTTTCCACTTACGATGATGGATTTTCTTCACATAGATCTCCATCTGAGGCAGCACCTCAAAACTTCCAGCTATACAGTTGGGAGACATTTCAGCCTGTGGGAGGTCTACTTCCTCAGCCCGAATGGACTGCTTGGGACCATACTGTCGAGTATTGTGCATTTGCATACCAACAATACATAGTCATATCTTCTCTGCGCCCACAATATAGATACCTGGGAGATGTTTCGATTCCATATGCTACCAGTGCTGTTTGGCACCGGAGACAACTGTTTGTGGCGACACCAACAACTATAGAAGTTGTTTTTGTGGACGCTGGGGTTACACAAATCGACATTGAAACTAAGAAGATGAAAGATGAGCAGAAAATGAGAGAAGCACAGACAAGAGCAATATCAGAGCATGGAGAGTTAGCACTAATTACAGTTGAAGGTCCTCAATCTTCTACAGAAGAAAGAATACCATTGAGGCCACCAATGCTGCAGGTGGTTCGACTGGCTTCATTTCAGCATGCTCCTTCAGTGCCACCTTTTCTATCGTTACCAAAACAGTCTAGAGTTGATGGTGATGACTCTTGGACAAAAGAAGCAGAGGAGAGGAGGACAAGTGAAGTAGCAGTTGGTGGCGGGGGTGTGTCTGTGGCAGTTACTCGTTTTCCGACAGAGCAAAAACGTCCAGTTGGGCCTCTTGTTGTAGTGGGTGTCAAGGATGGAGTTCTTTGGCTAATTGACAGGTACATGCGAGCTCACGCCTTATCCTTGAGTCATCCCGGTATTCGTTGCCGATGTCTTGCTGCATATGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGGAGAGAACACCATGATGATTTAGCACAATTTATGCTAGGAATGGGATATGCTACTGAAGCACTTCATTTACCTGGATTGTCAAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGTAGTGATTTGAAGAGAGCTCTTCATTGTCTTCTTACCATGAGTAACAGCCGGGATATAGGACATGATGGTACTGGACTTGGTTTGAATGACATTCTTAATTTAACAGATAAAAAACAAGATGCAACAGATAAAAAACAAGATGTAGTTGAAGGTGTTCAGGGCATAGTAAAATTCGCAAAAGAGTTCTTGGAACTTATTGATGCTGCAGATGCTACAGCACAGGGTGAAATTGCTCGTGAAGCTTTGAAGAGGTTAGCTGCCGCTGGATCAGTGAAAGGTGCTTTACAAGGTCATGAGTTGAGGGGATTAGCATTGCGCCTTGCAAATCATGGAGAGTTGACTCGGCTAAGTGGTCTGATAAACAACCTAATCACGCTCGGCCTGGGACGGGAAGCTGCATTTTCTGCTGCTGTTTTGGGTGACAATGCTCTAATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTTCTTCATGCTCATGCACATGGACGTCCAACTCTGAAGAATTTGGTTCAGGCCTGGAACCAAGTTCTACAGAGAGAGGTTGAGCCTACTCCGTCACAAAAAACCGATGCTACAGCTGCATTTTTAGCTTCTCTTGAGGAGCCTAAGCTTACGAGTTTGGCAGATGCAGGGAAGAAACCACCTATTGAAATCCTACCTCCGGGGATGATGTCACTTAACGCACCTATCTCCCTTCAGAAAAAACCAGCTTCTGCTGCTCAGAATTCCCAACCACAACCAGGCAAGCCATTGGCACTGGAAGCACCTCCTACAACCACAGCAGCGCCGGACAGTTCCGCGCCGCAGCCCGAGTCTGCATCTGCACCTGCACCTGCACCTGTTAGTGATCCACCTCCATCAGACTCCACGCCAACTCCTGAGGCTGCTCCACCTGAATCAACTTCCGGGGAAACCTCTGTAGATAATGGAGTTCCTGCCCCAACATCAGTGAGTGACGAAAATCCAAATAATGGGGAAACTGTTCAGGCAGAGCCTACAAGCGATCCAGCACCTCCTGAGGCCCCGTCACCAGTAGCAGAGGTTTCAGAGACTAATACTCCAAATCCAACTACAGTGCCTGCAAGTGGCGACCCGTTCATATGA 3999 0.4631 MLRLKAFRPSTDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESKGKPTEAIRGGSVKQVNFYDDDVRFWQLWHNRSAAAEAPTAVHTSTFSSPAPSTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLHCMEFLYRSGVGDGPLVAFGASDGVIRVLSMITWKLARRYTGGHKGTISCLRSFMAASGEALLVSGASDGLLIIWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGAPQLITIGADKTLAIWDTISFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPHALAPNKKLRVYCMVAHTLQPHLVAIGTNIGVVICEFDARSLPPVAPLPTPPDSREHSAVFVIERELKLLNFQLNNSVNPSLGNNSALSETGRSQGDSFEPLSVKQGKKHISTPVPHDSYSVLSVSSSGKYLAIVWPDIPYFSVYKVSDWSIVDSGSARLLAWDTCRDRFAILESTLPPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAGSSASVQVRIVLDDGTSNILMRSVGARSEPVIGLHGGALLGVAYRTSRRISPIAATAISTIQSMPLSGYGSSGLSSFSTYDDGFSSHRSPSEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDHTVEYCAFAYQQYIVISSLRPQYRYLGDVSIPYATSAVWHRRQLFVATPTTIEVVFVDAGVTQIDIETKKMKDEQKMREAQTRAISEHGELALITVEGPQSSTEERIPLRPPMLQVVRLASFQHAPSVPPFLSLPKQSRVDGDDSWTKEAEERRTSEVAVGGGGVSVAVTRFPTEQKRPVGPLVVVGVKDGVLWLIDRYMRAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGLSKRLEFDLAMKSSDLKRALHCLLTMSNSRDIGHDGTGLGLNDILNLTDKKQDATDKKQDVVEGVQGIVKFAKEFLELIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLINNLITLGLGREAAFSAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQVLQREVEPTPSQKTDATAAFLASLEEPKLTSLADAGKKPPIEILPPGMMSLNAPISLQKKPASAAQNSQPQPGKPLALEAPPTTTAAPDSSAPQPESASAPAPAPVSDPPPSDSTPTPEAAPPESTSGETSVDNGVPAPTSVSDENPNNGETVQAEPTSDPAPPEAPSPVAEVSETNTPNPTTVPASGDPFI 1332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04734 1332 PANTHER TSET COMPLEX MEMBER TSTF 1 1257 - -
Vivi6g04734 1332 MobiDBLite consensus disorder prediction 1238 1258 - -
Vivi6g04734 1332 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Vivi6g04734 1332 SMART WD40_4 250 292 IPR001680 GO:0005515
Vivi6g04734 1332 SMART WD40_4 198 241 IPR001680 GO:0005515
Vivi6g04734 1332 SMART WD40_4 1 39 IPR001680 GO:0005515
Vivi6g04734 1332 MobiDBLite consensus disorder prediction 1197 1332 - -
Vivi6g04734 1332 MobiDBLite consensus disorder prediction 828 848 - -
Vivi6g04734 1332 MobiDBLite consensus disorder prediction 1311 1325 - -
Vivi6g04734 1332 SUPERFAMILY WD40 repeat-like 6 499 IPR036322 GO:0005515
Vivi6g04734 1332 MobiDBLite consensus disorder prediction 1197 1213 - -
Vivi6g04734 1332 Gene3D - 3 349 IPR015943 GO:0005515
Vivi6g04734 1332 Gene3D - 904 1159 - -
Vivi6g04734 1332 MobiDBLite consensus disorder prediction 830 845 - -
Vivi6g04734 1332 MobiDBLite consensus disorder prediction 1259 1296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04734 Vivi-Chr6 150357118 150372616 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04734 - - gmx:100777567 2234.91