Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04732 ATGTTGAGGATAGTGAAGGAACCGGAGGAAGTGATGAGAATGCGAGGAGGTTCAGTACTTGGAAAGAAGACGATTCTGAAGAGCGACCATTTTCCTGGTTGCCAGAATAAGCTATTGATGCCTCAGATCGAAGGTGCTCCGAATTATCGTCAGGCGGAGTCTTTGCATGTTCATGGTGTTGCGATTCCGACGGTAGATGGAATTCGAAATGTTCTTAATCACATTGGTGCTCGCGGTAAAAAACAGCAAGTTCTTTGGATTAGTCTTCGCGAAGAACCGCTTGTGTACATTAATGGCAGACCTTTTGTTTTGCGAGATGTAGAGAGACCATTCTCCAACCTTGAATATACGGGAATTAATAGGGATAGGGTGGAACAAATGGAAGCTCGTTTGAAAGAAGACATCGTATTGGAAGCTAGAAGATACAGTAATAAGATCCTTGTAACGGATGAACTTCCTGATGGTCAGATGGTGGACCAATGGGAACCCGTGTCATGTGATTCTATAGAGACGCCGTTGGAGGTGTATGAGGCATTGCAAAAGGAGGGATACCTTGTTGATTATGAACGCGTTCCTGTAACTGATGAAAAATCGCCTAAGGAACTGGATTTTGATATTTTGGTGCATAAAATCTCTCAAGCTGATGTAAAAACAGAAATAATTTTTAATTGTCAAATGGGGCGCGGACGAACGACAACTGGAATGGTCATCGCAACTTTGGTCTACCTCAATCGAATTGGGGCCTCTGGGATTCCAAGAAGCAATTCGATGGGTAGAATATTTCAATCTATGACCAATGTTGCTGACCACTTGCCAAGCTCAGAGGAGGCAATTTGCAGGGGAGAATATGCAGTCATAAGAAGCTTGGTTCGGGTGTTAGAGGGTGGTGTTGACGGGAAAAGACAAGTGGACAAAGTCATTGACAAATGTGCTTCAATGCAGAATTTGCGTGAAGCAATTGGCACCTATCGTAATAGCATTTTGCGACAACCAGATGAGATGAAAAAGGAGGCATCACTTTCCTTTTTTGTGGAGTACTTGGAGAGATACTACTTTTTAATATGTTTTGCGGTGTACCTTCATTCAGAAAGGGATATACTCCTCTCTAGTACTGCTGGTCAAAGTAGTTTTTCTGATTGGATGAGAGCAAGGCCTGAACTCTACAGCATTATTCGCAGGTTACTCAGGAGAGATCCAATGGGCGCACTTGGATATTCAAGTTTTAAACCATCTTTAAAGAAGATAGCTGAAGCAACTGATGTCCGGCCTTCCGAAATGGGTATGGTTGCTGCCTTGAGAAAGGGCGAGGTTCTTGGTAGTCAAACTGTTCTTAAAAGTGATCACTGTCCTGGATGCCAAAATCCAAGTTTGCCGGAGAGAGTAGATGGTGCTCCTAATTTCCGACAAATTCCTGGATTTCCAGTTTTTGGTGTTGCGAATCCAACTGTTGATGGTATCCGATCAGTCATTCAAAGAATTGGCAGTACTAATGGTGGACACCCAATACTTTGGCATAATATGAGAGAAGAGCCGGTGATTTACATCAATGGGAAGCCATTTGTTCTTCGTGAAGTTGAAAGACCATACAAAAACATGTTGGAGTACACGGGTATTGGCCGTGAAAGAGTGGAGAAAATGGAAGCTCGGTTAAAAGTAGACATTTTAAAGGAAGCTAAACAATATAGCAATGCCATAATGGTTATTCATGAAACAGATGATGGACATATATATGATGCTTGGGAGCATGTTACCTCTGATGTGATTCAAACCCCGCTTGAAGTTTTCAAAAGCCTGGAAGCTGATGGGTTTCCCATTAAGTATGCACGTGTACCCATCACTGACGGAAAAGCTCCTAAACGTTCTGACTTCGATACTTTGGCAATTAATATTGCTTCTGCTGCAAAGGACACTAATTTTGTTTTCAATTGTCAGATGGGTCGGGGAAGGACTACTACTGGTACTGTCATAGCCTGCCTTGTGAAACTTCGCATTGATTTTGGTAGGCCCATTAAAATATTGAGTGATGATATGACCCACGAACAATCAAATAGCGGTTCTTCAAGTGGAGATGAAGCTGGGGGCTGTGTCACTGCATTGACCTCCAATACTTCAGAAGTGAAGACGGCCGAGAAACAAAACCGTGTTTTTGGTATAAATGACATTCTCTTGTTATGGAAGATAACCACATTATTTGATAATGGTATTGAATGCCGAGAGGCCTTAGATGCTGTTATTGATAGATGTTCTTCACTCCAAAACATTCGTCAAGCTGTTCTACAATATAGAAAAGTATCCAATCAACAGCATGTTGAGGATAGGGTAAGGAGGGTGGCTTTAAATCGCAGTGCTGAGTACTTGGAACGGTACTTCCGTCTAATTGCTTTTGCAGCATATCTTGGAAGCGAAGCATTCGATGGGTTTTGTGGACAAGGAGATTCCAAAATGACATTTAAGGTTTGGTCACGTCAAAGGCCAGAGGTACAGGCTATGAAATGGAGCATCAGATTAAGACCTGGGAGATTTTTCACTGTCCCTGAGGAGCTGAGAGAATCACAAGAGTCTCAGCATGGAGATGCAGTGATGGAGGCTACTGTCAAGACCAGAAATGGTTCTGTTTTGGGGAAGGGCTCCATACTTAAAATGTATTTCTTTCCTGGACAGAGAACTTCCAATCATATACAGATACACGGTGCACCTCATGTCTACAAGGTTGATGAATACCCTGTGTATTGCATGGCTACTCCAACCATCTCTGGGGCCAAGGAGATGCTAAACTACTTGGATGCCAAGTCTAAACCTGATTTCACTGCTCAAAAAGTTATATTGACCGATGTAAGAGAAGAAGCAGTTGTTTATATCAATTGTGTTCCCTTTGTCCTTAGGGAGTTAAACAAACATGTTGATACACTCAAACACGTCGGAATCACCGGTCCTGTGGTTGAACACATGGAGTCACGGCTGAAAGAAGACATACTGGCTGAGATTAAAGAGTCTGGTGGGCGAATGCTACTACACCGGGAAGAATATGACCCCTCGACAAACCAGTCTTCTGTGGTTGGATACTGGGAAAACATTATGGATGATGATGTGAAGACACCAGCAGAAGTTTATTCTTTTCTACAAGATGATGGATATGATATTGTCTATCGAAGAATACCGTTAACAAGAGAGAGAGATGCCTTGGCCTCCGATGTCGATGCAATACAGTACTGTCAAGATGACTCTGCAGGGAATTACCTCTTTGTATCACACACGGGTTTTGGTGGAGTCGCATATGCAATGGCCATCATTTGTATTAGACTTGGTGCAGATGCAAACTTTGCATCAAAAGTTCTGCAGCCTTCATTTGGTCCTGATACATCTGCAGTGACTGAAGAGAATTTGCATTCCCGAGCTTCTAATGAAACAGCACTTAGGATGGGCGACTATCGTGACATTTTGAACCTTACAAGAGTCCTCGCACATGGCCCCCAAAGCAAAGCTGATGTTGACATTGTCATTGAAAGATGTGCAGGCGCAGGGCATATACGAGATGATATTCTTTATTACAATAGAGAATTTGGAAAGCTTACTGATGTTGATGATGAGGAGCGTGCATATCTTATGGACATGGGCATCAAGGCTTTGAGGCGCTATTTTTTTCTTATCACATTCACATCGTATCTCTACTGTACCTCTCCTGCCGATACAGAATTTGCCGGGTGGATGGATGCAAGACCAGAGCTTGATCATCTATGTAATAATCTAAGAATAGATAAATAG 3762 0.4261 MLRIVKEPEEVMRMRGGSVLGKKTILKSDHFPGCQNKLLMPQIEGAPNYRQAESLHVHGVAIPTVDGIRNVLNHIGARGKKQQVLWISLREEPLVYINGRPFVLRDVERPFSNLEYTGINRDRVEQMEARLKEDIVLEARRYSNKILVTDELPDGQMVDQWEPVSCDSIETPLEVYEALQKEGYLVDYERVPVTDEKSPKELDFDILVHKISQADVKTEIIFNCQMGRGRTTTGMVIATLVYLNRIGASGIPRSNSMGRIFQSMTNVADHLPSSEEAICRGEYAVIRSLVRVLEGGVDGKRQVDKVIDKCASMQNLREAIGTYRNSILRQPDEMKKEASLSFFVEYLERYYFLICFAVYLHSERDILLSSTAGQSSFSDWMRARPELYSIIRRLLRRDPMGALGYSSFKPSLKKIAEATDVRPSEMGMVAALRKGEVLGSQTVLKSDHCPGCQNPSLPERVDGAPNFRQIPGFPVFGVANPTVDGIRSVIQRIGSTNGGHPILWHNMREEPVIYINGKPFVLREVERPYKNMLEYTGIGRERVEKMEARLKVDILKEAKQYSNAIMVIHETDDGHIYDAWEHVTSDVIQTPLEVFKSLEADGFPIKYARVPITDGKAPKRSDFDTLAINIASAAKDTNFVFNCQMGRGRTTTGTVIACLVKLRIDFGRPIKILSDDMTHEQSNSGSSSGDEAGGCVTALTSNTSEVKTAEKQNRVFGINDILLLWKITTLFDNGIECREALDAVIDRCSSLQNIRQAVLQYRKVSNQQHVEDRVRRVALNRSAEYLERYFRLIAFAAYLGSEAFDGFCGQGDSKMTFKVWSRQRPEVQAMKWSIRLRPGRFFTVPEELRESQESQHGDAVMEATVKTRNGSVLGKGSILKMYFFPGQRTSNHIQIHGAPHVYKVDEYPVYCMATPTISGAKEMLNYLDAKSKPDFTAQKVILTDVREEAVVYINCVPFVLRELNKHVDTLKHVGITGPVVEHMESRLKEDILAEIKESGGRMLLHREEYDPSTNQSSVVGYWENIMDDDVKTPAEVYSFLQDDGYDIVYRRIPLTRERDALASDVDAIQYCQDDSAGNYLFVSHTGFGGVAYAMAIICIRLGADANFASKVLQPSFGPDTSAVTEENLHSRASNETALRMGDYRDILNLTRVLAHGPQSKADVDIVIERCAGAGHIRDDILYYNREFGKLTDVDDEERAYLMDMGIKALRRYFFLITFTSYLYCTSPADTEFAGWMDARPELDHLCNNLRIDK 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04732 1253 CDD PTP_paladin 433 748 - -
Vivi6g04732 1253 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 10 246 IPR029021 -
Vivi6g04732 1253 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 431 663 IPR029021 -
Vivi6g04732 1253 FunFam Paladin isoform B 880 1134 - -
Vivi6g04732 1253 FunFam Paladin isoform A 25 266 - -
Vivi6g04732 1253 PANTHER TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE 424 1171 - -
Vivi6g04732 1253 FunFam Paladin isoform A 443 677 - -
Vivi6g04732 1253 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 862 1106 IPR029021 -
Vivi6g04732 1253 SMART PTPlike_phytase_2 943 1101 - -
Vivi6g04732 1253 SMART PTPlike_phytase_2 505 661 - -
Vivi6g04732 1253 SMART PTPlike_phytase_2 87 242 - -
Vivi6g04732 1253 Gene3D Protein tyrosine phosphatase superfamily 25 280 IPR029021 -
Vivi6g04732 1253 Gene3D Protein tyrosine phosphatase superfamily 444 687 IPR029021 -
Vivi6g04732 1253 Gene3D Protein tyrosine phosphatase superfamily 880 1115 IPR029021 -
Vivi6g04732 1253 CDD PTP_paladin 15 310 - -
Vivi6g04732 1253 Pfam Inositol hexakisphosphate 87 241 - -
Vivi6g04732 1253 Pfam Inositol hexakisphosphate 505 661 - -
Vivi6g04732 1253 Pfam Inositol hexakisphosphate 944 1099 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04732 Vivi-Chr6 150314877 150323338 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04732 - - gmx:100788460 2192.16