Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04731 ATGACAATGGCGAGTGAGTTACATGGAATTTCTATGTTGTTGAGTTCAAAGAAGCCATTCGTCGACCGTGACAGGGTTCTGTCTTCTTCGTTCTCTGGTAGCAAGTTGCATTCAAGGAATGCAGCATTTGATTTTCCATATGGAAAATTCGTAAGTGTTGTACAAAGAAAAAACACAACTAAAAGATTTTTGGCTAATGCTACGCTTGCCGATGTTGCAAACAATTTTATGACCCTACAATCACCATTTTTTGCTGAAGAAGAGGCCAACCCAAAGACTGTTGCATCGATCATTTTAGGTGGTGGAGCAGGAACTCGTCTATTTCCCCTTACTCAAAAAAGGGCTAAACCTGCTGTGCCATTCGGAGGTTGTTATAGGCTGGTGGACATACCAATGAGTAATTGTATTAATAGCGGAATTAGCAAAATTTACGTCCTTACACAGTTCAATTCTCAGTCCCTCAATCGCCACATTGCCCGAACATATAATTTGGGAGGTGGCGTCAACTGTGGCGGTAGTTTTATTGAGGTATTGGCAGCATCACAAACACTCGGCGAATCAGGAAATAAGTGGTTTCAGGGTACAGCCGATGCTGTAAGACGGTTCCTTTGGTTGTTTGAGGATGCTGAGCATAAAAACATAGAGAACATTCTGATATTGTGTGGTGATCAGCTTTATCGAATGGATTACATGGAACTTGTGAAGAAGCACATTAATTCATATGCTGATATGTCGGTATCGTGTCTACCAGTGGATGGCAGTCGTGCCTCTGATTTTGGATTAGTAAAGGTTGACGAAAGAGGACAGATACGCCAATTCATGGAAAAACCGAAGGGAGAATTATTACGATCTATGCATGTAGATACGAGTATTTTTGGATTATCCACACAAGAAGCAAGGAAGCTTCCATATATCGCATCGATGGGTATATACGTGTTTAAGCTAGACGTTCTTCGCAAACTTCTCAGGAACTGTTATCCTAATGCAAATGATTTTGGATCCGAGGTCCTTCCGAAGGCTATAAAAGATTTTAAAGTTCAGGCATGTCTTTTCAGTGGTTATTGGGAAGATATTGGGACTATAAAATCTTTCTATGATGCAAACTTGGCGCTTATGGACAAGCCGCCAAAGTTTCAGTTATATGATCAGTCAAAGCCTATTTTTACGTGTCCTCGGTTCCTACCCCCGACTAAAATGGAGAAGTGTCAGGTGATTAATTCTTTGATTTCAGATGGTTGCTTTTTAAGAGAGTGCATGGTTGACCATTCCATAGTTGGAATTCGCTCAAGGCTCGATTCTGGAGTGCAGCTAAAGGATACCTTGATGATGGGTGCCGACTATTATCAGACAGAGGCTGAAATTGCGTCTCTTTTAGCAGCGGGGGACGTTCCTATAGGCATAGGCAAGAATACGAAAATTATGAATTGTATAATCGACAAAAATGCAAGAATTGGAAGCAATGTAATAATTGCAAACAAAGAAAATGTGCAGGAGGGTGACAGATCGTCTGAGGGATTTTATATTCGATCAGGGATCACGGTGGTGTTAAAAAACTCGGTAATAAACAACGGAACGATCATTTAG 1584 0.4097 MTMASELHGISMLLSSKKPFVDRDRVLSSSFSGSKLHSRNAAFDFPYGKFVSVVQRKNTTKRFLANATLADVANNFMTLQSPFFAEEEANPKTVASIILGGGAGTRLFPLTQKRAKPAVPFGGCYRLVDIPMSNCINSGISKIYVLTQFNSQSLNRHIARTYNLGGGVNCGGSFIEVLAASQTLGESGNKWFQGTADAVRRFLWLFEDAEHKNIENILILCGDQLYRMDYMELVKKHINSYADMSVSCLPVDGSRASDFGLVKVDERGQIRQFMEKPKGELLRSMHVDTSIFGLSTQEARKLPYIASMGIYVFKLDVLRKLLRNCYPNANDFGSEVLPKAIKDFKVQACLFSGYWEDIGTIKSFYDANLALMDKPPKFQLYDQSKPIFTCPRFLPPTKMEKCQVINSLISDGCFLRECMVDHSIVGIRSRLDSGVQLKDTLMMGADYYQTEAEIASLLAAGDVPIGIGKNTKIMNCIIDKNARIGSNVIIANKENVQEGDRSSEGFYIRSGITVVLKNSVINNGTII 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04731 527 CDD ADP_Glucose_PP 97 358 - -
Vivi6g04731 527 FunFam Glucose-1-phosphate adenylyltransferase 393 527 - -
Vivi6g04731 527 SUPERFAMILY Trimeric LpxA-like enzymes 391 527 IPR011004 -
Vivi6g04731 527 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 100 119 IPR005836 GO:0005978|GO:0008878
Vivi6g04731 527 Gene3D Hexapeptide repeat proteins 393 527 - -
Vivi6g04731 527 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 80 392 IPR029044 -
Vivi6g04731 527 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 306 316 IPR005836 GO:0005978|GO:0008878
Vivi6g04731 527 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 67 527 IPR011831 GO:0005978|GO:0008878
Vivi6g04731 527 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 191 199 IPR005836 GO:0005978|GO:0008878
Vivi6g04731 527 NCBIfam glucose-1-phosphate adenylyltransferase 95 491 IPR011831 GO:0005978|GO:0008878
Vivi6g04731 527 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 488 IPR029044 -
Vivi6g04731 527 CDD LbH_G1P_AT_C 395 521 - -
Vivi6g04731 527 Pfam Nucleotidyl transferase 96 372 IPR005835 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04731 Vivi-Chr6 150310419 150314248 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04731 K00975 - gmx:100805739 890.567