Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04715 ATGTCATTGTCCTTTCTCTCCCTCTTATTCTTTTGTTCTACTCTCTTTCTAAGAGTTGAATCAAGGTACTCTCCAATTACACCAATCACATCTCTAATAACTAAAAACCTTTATGATTCAATTTTCCTACACAAAGATGACACTGCATGTCCTGCAAAAAACTTCTACCCTTATCAATCCTTCATTGAAGCTTCCAAGTCTTTCCCACAATTTGGTACTACAGGTTGTTTGGCCACAAGAAAACGTGAGATAGCTGCTTTTCTTGCTCAGATTTCTCATGAAACTACTGGTGGATGGTCCACTGCACCTGATGGCCCATTCTCTTGGGGTTTATGCTTCAAAGAGGAAATTAGTCCTCAGAGTATTTACTGTGATTCCACTGATAAAGATTGGCCTTGTTTTGAAGGGAAAAGCTATAAAGGAAGAGGTCCCATTCAACTTTCTTGGAATTTCAACTATGGACCAGCAGGGAAGGCATTGGGATTTGATGGGCTGAAAAATCCAGAAATTGTATCAAACAATTCAGTGATTGCTTTCAAAACTGCTCTATGGTTTTGGATGACAGAAAGAAAACCAACACCTTCATGCCACAATGTCATGGTTGGAAAATATGTAGCAACAGAAGCTGACATAGCTGCTAATAGAACAGCAGGTTATGGTTTGGTCACAAACATAATCAATGGTGGATTAGAATGTGGAATTCCTAATGATGCAAGAGTCAATGATCGAATCGGGTTTTTTCAAAGATATTCCAAGTTGTTCAATGTTGATACTGGACCTAACTTGGATTGTGCATATCAGAAATCGTTATAA 813 0.3838 MSLSFLSLLFFCSTLFLRVESRYSPITPITSLITKNLYDSIFLHKDDTACPAKNFYPYQSFIEASKSFPQFGTTGCLATRKREIAAFLAQISHETTGGWSTAPDGPFSWGLCFKEEISPQSIYCDSTDKDWPCFEGKSYKGRGPIQLSWNFNYGPAGKALGFDGLKNPEIVSNNSVIAFKTALWFWMTERKPTPSCHNVMVGKYVATEADIAANRTAGYGLVTNIINGGLECGIPNDARVNDRIGFFQRYSKLFNVDTGPNLDCAYQKSL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04715 270 FunFam Endochitinase (Chitinase) 115 173 - -
Vivi6g04715 270 PANTHER CHITINASE-RELATED 27 268 - -
Vivi6g04715 270 CDD chitinase_GH19 33 264 - -
Vivi6g04715 270 ProSitePatterns Chitinases family 19 signature 2. 177 187 IPR000726 GO:0004568|GO:0006032|GO:0016998
Vivi6g04715 270 Gene3D Endochitinase, domain 2 115 173 - -
Vivi6g04715 270 SUPERFAMILY Lysozyme-like 29 269 IPR023346 -
Vivi6g04715 270 PIRSF Endochitinase 11 270 IPR016283 GO:0004568|GO:0005975
Vivi6g04715 270 Gene3D - 36 269 - -
Vivi6g04715 270 Pfam Chitinase class I 32 264 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04715 Vivi-Chr6 150014020 150016225 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04715 18 268 Glycoside Hydrolase AT4G01700 72.510 3.12e-147 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04715 - - gmx:100784196 466.848