Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04696 ATGGCGGAAACTTTTCTATTCACATCTGAATCGGTGAACGAGGGTCACCCCGACAAGCTCTGTGACCAGATCTCCGATGCGGTGCTCGACGCCTGTCTTGAACAGGATCCTGACAGCAAGGTTGCCTGTGAGACATGTACCAAGACTAACATGGTGATGGTTTTTGGAGAGATTACAACTAAGGCTAATGTGGATTATGAGAAGATTGTTCGTGACACGTGCCGCAACATTGGATTTGTATCCGATGATGTTGGTCTTGATGCTGACAAATGTAAGGTTTTGGTTAATATTGAGCAGCAGAGCCCTGATATTGCTCAGGGTGTTCATGGACATTTCTCGAAGAGTCCGGAAGAGGTTGGTGCTGGTGATCAAGGTCATATGTTTGGTTATGCTACTGATGAGACTCCTGAGCTTATGCCTTTGAGCCATGTCCTTGCAACCAAACTTGGTGCTCGTCTTACCGAGGTTAGGAAGAATGGTACCTGTGCTTGGCTGAGACCAGACGGCAAGACACAAGTAACTGTTGAGTACTACAATGAGAACGGTGCTATGGTTCCGGTTCGTGTCCACACTGTCCTCATTTCCACCCAACACGACGAGACTGTCAGTAACGACCAGATCGCCGCTGATCTTAAAGAGCATGTCATCAAGCCTGTTATTGCCGAGAAGTACTTGGACGAGAAGACCATCTTCCACCTCAACCCTTCCGGCCGCTTTGTCATTGGAGGTCCTCACGGTGATGCCGGTCTCACTGGAAGAAAGATTATCATTGATACCTACGGAGGTTGGGGAGCCCACGGTGGAGGTGCCTTCTCTGGCAAGGACCCAACTAAGGTCGACAGAAGTGGTGCCTATGTCGTTAGGCAGGCAGCAAAGAGTATCGTGGCTAACGGTCTTGCTCGCAGATGCCTTGTTCAAGTTTCATACGCTATCGGTGTGCCAGAGCCTTTGTCAGTGTTCGTCGACAGTTACGGAACCGGAAAGATTCCCGACAAGGAAATTCTTCAGATTGTGAAGGAAAGTTTTGACTTCAGACCTGGAATGATCACCATTAACTTGGACCTTAAGAGAGGTGGCAATAGCAGGTTTCTTAAGACAGCTGCTTATGGACACTTTGGAAGGGATGACCCTGATTTCACTTGGGAAGTTGTGAAGCCACTCAAGTGGGACAAGCCTCAAGCTTAA 1185 0.4852 MAETFLFTSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRDTCRNIGFVSDDVGLDADKCKVLVNIEQQSPDIAQGVHGHFSKSPEEVGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVSNDQIAADLKEHVIKPVIAEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVVRQAAKSIVANGLARRCLVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILQIVKESFDFRPGMITINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWDKPQA 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04696 394 Gene3D - 12 280 - -
Vivi6g04696 394 CDD S-AdoMet_synt 6 385 - -
Vivi6g04696 394 PIRSF MAT 1 393 IPR002133 GO:0004478|GO:0005524|GO:0006556
Vivi6g04696 394 SUPERFAMILY S-adenosylmethionine synthetase 116 240 IPR022636 GO:0004478|GO:0006556
Vivi6g04696 394 Gene3D - 118 382 - -
Vivi6g04696 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 2 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Vivi6g04696 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
Vivi6g04696 394 FunFam S-adenosylmethionine synthase 135 242 - -
Vivi6g04696 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 382 IPR022630 GO:0004478|GO:0006556
Vivi6g04696 394 FunFam S-adenosylmethionine synthase 12 128 - -
Vivi6g04696 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Vivi6g04696 394 FunFam S-adenosylmethionine synthase 263 382 - -
Vivi6g04696 394 SUPERFAMILY S-adenosylmethionine synthetase 241 389 IPR022636 GO:0004478|GO:0006556
Vivi6g04696 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
Vivi6g04696 394 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Vivi6g04696 394 NCBIfam methionine adenosyltransferase 6 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Vivi6g04696 394 Hamap S-adenosylmethionine synthase [metK]. 3 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Vivi6g04696 394 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Vivi6g04696 394 Gene3D - 5 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04696 Vivi-Chr6 149726332 149728422 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04696 K00789 - rcu:8265897 766.918