Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04694 ATGTGTAAACTTGTTGGACATGAAGGTTCAATTTTCCGAATAGCATGGTCGTCTTGCGGATCTAAACTGCTATCTGTTTCTGACGATCGTAGCGCACGTGTCTGGACAATTCCTATTGAAAGGGAAGATTCATTGTACCATGACCCCATTGCCCTTGTCTTATTTGGACATAATGCTCGAGTTTGGGACTGCTGTATTTCTGATCATTTTATTGTCACTGTCAGTGAGGATTGTACATGTCGTATATGGGGAATTGATGGTGAACAGCTGGAAGTCATTAGGGAGCACATAGGAAGGGGTATATGGAGATGTTTGTATGATCCAAATTTGTCACTTCTTATAACCGCCGGGTTTGATTCTGCTATCAAGGTGCATAGGCCTCATGCTTTTCTGTCCAGGGGCTTGGCTGAAGCACAATTGTCCCACGAAAGAGCAGAGATGTTTTCTATTTGCATCCCTAATGTGCTGGAGCATATTGGATTGACCGACAGCAAGAGTGAATACGTTCGTTGTTTGCGTTTTTCCTCTCAGGATTCTCTTTATGTTGCTACCAATCATGGTTATCTCTACCATGCTAAATGTGAAACTGGAGGTGCTCATTGGAATCAGCTTGTCCAGGTCAGCAACAGGACTCCAATTATCTGTATGGATTTATTGTCCAATGACTCATTTGAACTTGGATGTGGTGATGAAGATTGGATCGCCATTGGAGATGGTAAAGGAAATATGACAGTCATTGGAGTTACTAATAATGATTCTACTCCTACAGTTAGATTGAGCTTTACATGGCAAGCTGAAATGGAGAGACAGCTTTTGGGTACTTATTGGTGCAAATCCTTGGGATGTAGGTATGTCTTTACTGCCAACCCTAGAGGAAAATTGAAACTCTGGAGGTTGCCCGACCCTTCACAATCTAATAGTCTGAGCTCCGCGAGGGATAACATTGTGTCACTTACAGCAGAGTTCATATCAAGTTACGGAATGCGAATCATGTGTTTGGACGCATGCTTGGAGGATGAGGTCCTAGCTTGTGGAGATCTACGTGGTAATATGATTTTGTTTCCACTGCTAAAAGATCTGGTGCTGGGCACATCTGTTGCACAGGAGATGAAAATACCCCCAGTAAATCATTTTAAAGGTGTTCATGGGATTTCAAGCGTCTCCAGCGTTGTTGTAACTAAGCTTGGTTACAATCAAATTGAGATACGCTCAACTGGAGCAGATGGCTGTGTATGCTACCTGGAATACGATAAAGAAATGCAGAATTTGCAATTTACAGGGATGAAACAAGTGAAAGAGTTGACTTTGATTGAACATGTTTCTGTTGATAACATGTCGGAAGCTACATCATCAAGAAGCTACGCAGCAGGTTTTGCATCTGTAGATTTCATAATATGGAACTTAATCAATGAGAATAAGGTGGTGAAAATTCCATGTGGCGGCTGGCGGCGTCCTCATTCCTATTTTCTAGGTGATTTACCAGAGATGAAGAACTGTTTTGCCTTTGTTAAGGATGAAATGATATATATACATAGACACTGGATTAATGATAACAATGGGAAGATATACCCTTTGAGTTTGCATATGCAATTCCATGGGAGGGAGATACATTCATTGTGCTTTATACATGGAGATATGCTCCTGGGAGATTGTTATAAGCATGCATTATTTTCTAAATCAAGTTGGATTGCAACTGGATGTGAAGATGGGACTGTGAGACTGACTTGGTACTCTCCAGGTATTGAGAACTGGTCGACATCAAAATTGCTCGGTGAGCATGTTGGTGGATCCGCTGTACGATCAATTTGCTGTGTCTCAAAACTACACATCATTCCATCAGCTACAATCACTGTACCTGATGAGAGGAGCGAACTAAACGTTGCTGATGCAGACAAAGATAGTCCAACCTTACTGATATCAGTGGGTGCAAAGCGTGTCTTAACTTCTTGGCTACTCAAAAGTATGAGGTTGGAAAACAAAATTGACTTCCACTCTGATAATCAGCAAGATTCAAAAGAAGTTGATGATCAAGTTTTGTCAAGTTTGTCTTCAATGACGTTCCAGTGGCTTTCCACTGACATGCCAACCAAATATTCAACTACACACAGATATACAGAAAATAATGCGGGGAATGTAGATGTTGCTGAAAATGGTTCAAATATAAAAATTGATGCTGAACCTAGAATGGTGAACTTGGTCAGAGATAAAAATGAGGATGACTGGAGATATCTTGCAGTCACTTCTTTTCTTGTTAAATGTGCTGGTTCCAGGATATCTGTCTGTTTTGTCGTCGTTGCTTGTTCGGATGCTACAATCATGTTACGCGCTTTAATTTTGCCCTTTCGTTTATGGTTTGACATTGCATTACTTGTTCCTTTATTGGCACCCGTTTTATCATTGCAGCATATTGTCTTTCCCACTCGTACGCGTCATAAAGATAGCATCCAAGTTGGAAATGCTTACATTGTGATTAGCGGATCTACTGATGGGTGTGTTACATTTTGGGACCTGACTGACAGTGTGGAAGCTTTTATGCAGAGAATTTCTGTTTGTGATGTAGAGAAGCTTTTTGATTGTCAGAAACGACCGCGCACAGGTAGAGGAAGTCAGGGAGGTAGACAGTGGAGATTTTTCAGCCGTGGGTTATCAAAGAAAAGACAAGATAACAATCCAGTGACATCAAAAGCTAAAAACAAAGCCGAAAGCACCAATTCTACCACACATGGGACCTCTTCAGTGCCAAATAAATCTGAAGACAGCAATACGGTTTGTTCTCAAGCCATGCATGCAGCTTCCCCTGAATTAGAAAATAAGACTGATAATTCGTCAGCAGAAATATGCGAAGTACAGCCTCTACGCCTTTTGAAAAATGTTCACCAATCTGGTGTCAACTGTCTCCATGTATCAGAGATAAAAGGTGTCCAAAATAATGATAGTTCTTGTATGTACAGCATAGTTAGTGGGGGCGATGATCAATCACTTCATCATCTCGTGGTTGAGTTATCACCTAAAGCAACAAATCTTGATGGGATTTTAACCCCACATATAACCCATTTGGCCACTGAACCTGAATATGTAAAGGACACCAATTTTCAAAATCAGAGTAGAAGCTACGAGATCAGATTCTTAAATTCCGAAAAATTCCCTTCTGCCCACAGCTCTTCTGTGAAAGGTGTCTGGACAGATGGATCTTGGGTGTTTTCGACTGGACTTGATCAGCGAGTCAGATGTTGGCATCTTCACCAGAATAAACTAATAGAACGTGCACACCTAATAGTTAGTGTGCCGGAGCCAGAAGCGTTATCTGCTAAGGCTTGTAGCAGGAACTATTATCAGATTGCTGTTGCTGGAAGAGGGATGCAAATAGTGGATTTCTCGGGATGCTAA 3387 0.4128 MCKLVGHEGSIFRIAWSSCGSKLLSVSDDRSARVWTIPIEREDSLYHDPIALVLFGHNARVWDCCISDHFIVTVSEDCTCRIWGIDGEQLEVIREHIGRGIWRCLYDPNLSLLITAGFDSAIKVHRPHAFLSRGLAEAQLSHERAEMFSICIPNVLEHIGLTDSKSEYVRCLRFSSQDSLYVATNHGYLYHAKCETGGAHWNQLVQVSNRTPIICMDLLSNDSFELGCGDEDWIAIGDGKGNMTVIGVTNNDSTPTVRLSFTWQAEMERQLLGTYWCKSLGCRYVFTANPRGKLKLWRLPDPSQSNSLSSARDNIVSLTAEFISSYGMRIMCLDACLEDEVLACGDLRGNMILFPLLKDLVLGTSVAQEMKIPPVNHFKGVHGISSVSSVVVTKLGYNQIEIRSTGADGCVCYLEYDKEMQNLQFTGMKQVKELTLIEHVSVDNMSEATSSRSYAAGFASVDFIIWNLINENKVVKIPCGGWRRPHSYFLGDLPEMKNCFAFVKDEMIYIHRHWINDNNGKIYPLSLHMQFHGREIHSLCFIHGDMLLGDCYKHALFSKSSWIATGCEDGTVRLTWYSPGIENWSTSKLLGEHVGGSAVRSICCVSKLHIIPSATITVPDERSELNVADADKDSPTLLISVGAKRVLTSWLLKSMRLENKIDFHSDNQQDSKEVDDQVLSSLSSMTFQWLSTDMPTKYSTTHRYTENNAGNVDVAENGSNIKIDAEPRMVNLVRDKNEDDWRYLAVTSFLVKCAGSRISVCFVVVACSDATIMLRALILPFRLWFDIALLVPLLAPVLSLQHIVFPTRTRHKDSIQVGNAYIVISGSTDGCVTFWDLTDSVEAFMQRISVCDVEKLFDCQKRPRTGRGSQGGRQWRFFSRGLSKKRQDNNPVTSKAKNKAESTNSTTHGTSSVPNKSEDSNTVCSQAMHAASPELENKTDNSSAEICEVQPLRLLKNVHQSGVNCLHVSEIKGVQNNDSSCMYSIVSGGDDQSLHHLVVELSPKATNLDGILTPHITHLATEPEYVKDTNFQNQSRSYEIRFLNSEKFPSAHSSSVKGVWTDGSWVFSTGLDQRVRCWHLHQNKLIERAHLIVSVPEPEALSAKACSRNYYQIAVAGRGMQIVDFSGC 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04694 1128 Gene3D - 1 137 IPR015943 GO:0005515
Vivi6g04694 1128 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 4 37 - -
Vivi6g04694 1128 SUPERFAMILY WD40 repeat-like 230 1085 IPR036322 GO:0005515
Vivi6g04694 1128 Gene3D - 813 1094 IPR015943 GO:0005515
Vivi6g04694 1128 Gene3D - 138 454 IPR015943 GO:0005515
Vivi6g04694 1128 Gene3D - 511 783 IPR015943 GO:0005515
Vivi6g04694 1128 ProSiteProfiles Trp-Asp (WD) repeats profile. 4 37 IPR001680 GO:0005515
Vivi6g04694 1128 Pfam WD domain, G-beta repeat 536 574 IPR001680 GO:0005515
Vivi6g04694 1128 Pfam WD domain, G-beta repeat 4 35 IPR001680 GO:0005515
Vivi6g04694 1128 PANTHER WD REPEAT PROTEIN 2 1127 - -
Vivi6g04694 1128 SUPERFAMILY WD40 repeat-like 3 351 IPR036322 GO:0005515
Vivi6g04694 1128 MobiDBLite consensus disorder prediction 884 923 - -
Vivi6g04694 1128 SMART WD40_4 1036 1079 IPR001680 GO:0005515
Vivi6g04694 1128 SMART WD40_4 1 36 IPR001680 GO:0005515
Vivi6g04694 1128 SMART WD40_4 801 836 IPR001680 GO:0005515
Vivi6g04694 1128 SMART WD40_4 86 126 IPR001680 GO:0005515
Vivi6g04694 1128 SMART WD40_4 524 576 IPR001680 GO:0005515
Vivi6g04694 1128 SMART WD40_4 47 84 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04694 Vivi-Chr6 149658770 149669019 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04694 K24737 - gmx:100780968 1764.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04694 6 149658770 149669019 Vivi6g04694 6 149658770 149669019 ECH