Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04679 ATGGCTTTGATCTCAACTACCAACGTGTTCAACCTTGCGAGTTTTCAGCTCAAACAAACTGAAATTCCTTTTTCAACTTTCAGCGTCATTCGCAAGCGTTTCGGAGATTGTCCTAACCGCAATGCGGTGCTTCTAAGAACCAGAAGAAACGCTCCGATTCTTCCCAAAGTCCGAGCTCAGAATCTTCCTGACTACGTTCCGGATTCCAAGTTTTACAAAATTGAAGCGATTATCAGGTCATGGAGAATTCCTCATGTTTCTTCGGCTTTGTTGAGAATGGGAATTCGTGGGGTCACTGTATCTGATGTCAAGGGGTTTGGTGCTCAGGGTGGTACGAAAGAGAGGCATGAAGGCTCTGAATTTTCTGAAGACAGTTTTGTTGTCAAAGTTAAAATGGAAATAGTAGTGAGGAAAGACCAGGTTGAGGCGGTACTAGACAAAATTTTGGAGACAGCAAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTTGATGCCAGTATCTGATGTAATAAGAGTTCGCACAGGTGAGCGTGCGGAAAATGCTGAGAGGATGGCTGGTGGAATGACTGATATGTCATCTGTTTGA 588 0.4405 MALISTTNVFNLASFQLKQTEIPFSTFSVIRKRFGDCPNRNAVLLRTRRNAPILPKVRAQNLPDYVPDSKFYKIEAIIRSWRIPHVSSALLRMGIRGVTVSDVKGFGAQGGTKERHEGSEFSEDSFVVKVKMEIVVRKDQVEAVLDKILETARTGEIGDGKIFLMPVSDVIRVRTGERAENAERMAGGMTDMSSV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04679 195 ProSitePatterns P-II protein C-terminal region signature. 154 167 IPR017918 GO:0006808|GO:0030234
Vivi6g04679 195 ProSiteProfiles P-II protein family profile. 71 183 IPR002187 GO:0006808|GO:0030234
Vivi6g04679 195 Gene3D - 60 193 IPR015867 -
Vivi6g04679 195 SMART P_II_3 74 176 IPR002187 GO:0006808|GO:0030234
Vivi6g04679 195 Pfam Nitrogen regulatory protein P-II 72 178 IPR002187 GO:0006808|GO:0030234
Vivi6g04679 195 PRINTS P-II protein signature 123 146 IPR002187 GO:0006808|GO:0030234
Vivi6g04679 195 PRINTS P-II protein signature 154 174 IPR002187 GO:0006808|GO:0030234
Vivi6g04679 195 PRINTS P-II protein signature 93 111 IPR002187 GO:0006808|GO:0030234
Vivi6g04679 195 PRINTS P-II protein signature 72 87 IPR002187 GO:0006808|GO:0030234
Vivi6g04679 195 SUPERFAMILY GlnB-like 72 182 IPR011322 -
Vivi6g04679 195 PANTHER NITROGEN REGULATORY PROTEIN P-II 39 194 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04679 Vivi-Chr6 149403958 149407506 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04679 - - gmx:100775624 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04679 6 149403958 149407506 Vivi6g04679 6 149403958 149407506 ECH