Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04674 ATGGACGCAAAAGATATCCTCGGATTACCCAAAAACTCGTTCCCATCTTCAATTGAGAAAAAATCTCGACCTCCCAAAGAGTCTCAGCGAAAACCTGATGGCATTTCTCGCGAGGTTTATGCACTTACTGGTGGTGTGCCACCTCTTATGCCCGCTGTTGATGCATCACAGTTGAAGAAAAAGCCTCCTCCTCATGAAAAGGTTACTTGGCAGTGGCTTCCGTTCACCAATTCTGCTCGTAAAGATGATCTTAATCTTTATCATTGGGTTCGAATAGTCAACGGTGTTCTACCTACCGGAGACTATTCCTTTGCCAAGTATAACAAGTCTGTTGATATTATCAAGTACACAGACGAGGAGTATGAAAAGTATTTAACAGATCCTATGTGGACCAAGGAAGAGACAAATGAACTATTCGACTTGTGTGAGAGGTTCGATCTTCGTTTTGTTGTGATAGCTGACAGGTTCACATCATCTCGGACTGTTGAGGAGTTAAAGAGTCGGTATCATAGTGTGTCACGGGCTATATTACTTGCTAGGGCTACGTCTTCTGGCGATGTTGCAACACATCCTCTCATAAAGGAACCTTATAATGTTTCACAAGAAATGGAACGCAAACGGGCACTGTCCATGGTCCTCTCCCAAACAAGACAGCAAGAGAAAAGAGATGAAGAGGTTCTTATTGAAGCTAAAAGAATAGCCGAGTTACGGATGGCTTCAAAGGTTACTGAACAGTCTCAAACGGCTGTTGCTTCAAATGCTGAAGCAGGAGTTACAGAGAGGGCTGTCCCTGGTGAAACTATATCTCCATCAAATGTGCAACTTCCACCAATGGTTGTTCCTTCATTGGCAGACAACGCTTCTACTCTAGCTTCTCTTCGTATGCTTCGAGTATATTTGAGGACATATGCACTTGATCAAATGGTGCAAGCTTCAAACTCATCTGCTGGACTTCGGACTATCAAACGGGTTGAGCAAACATTGCAAGATCTTGGGGTCAATTTGAAACCAAGGGTTCCAACAAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAGAGAAATACTAACTTGGCTGAATCTCCAGAAACAGGTGCAATATAAAGAGGCTGAAGGTTCATCTTTCCGTGACGGGTCCTATGGTGAAACACCAGGCACACCAAAGGATCGCACATTTATTCCCGACTCTTTGAATTTTGGAGTTTCAAGCGAAAGGGTTAGCAAAAAGGACCAAAAACGCAAGGGGCATGGAGCTCCACCTACAGCGGCCCATAAAAGACCTAGAAAACAAAAGGCTTCAGATCTTTAA 1308 0.4358 MDAKDILGLPKNSFPSSIEKKSRPPKESQRKPDGISREVYALTGGVPPLMPAVDASQLKKKPPPHEKVTWQWLPFTNSARKDDLNLYHWVRIVNGVLPTGDYSFAKYNKSVDIIKYTDEEYEKYLTDPMWTKEETNELFDLCERFDLRFVVIADRFTSSRTVEELKSRYHSVSRAILLARATSSGDVATHPLIKEPYNVSQEMERKRALSMVLSQTRQQEKRDEEVLIEAKRIAELRMASKVTEQSQTAVASNAEAGVTERAVPGETISPSNVQLPPMVVPSLADNASTLASLRMLRVYLRTYALDQMVQASNSSAGLRTIKRVEQTLQDLGVNLKPRVPTKAVCAEHLELRREILTWLNLQKQVQYKEAEGSSFRDGSYGETPGTPKDRTFIPDSLNFGVSSERVSKKDQKRKGHGAPPTAAHKRPRKQKASDL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04674 435 MobiDBLite consensus disorder prediction 370 435 - -
Vivi6g04674 435 SMART sant 126 175 IPR001005 -
Vivi6g04674 435 SUPERFAMILY Homeodomain-like 129 172 IPR009057 -
Vivi6g04674 435 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 1 425 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Vivi6g04674 435 FunFam DNA methyltransferase 1-associated protein 1 98 185 - -
Vivi6g04674 435 Pfam SANT/Myb-like domain of DAMP1 102 176 IPR032563 -
Vivi6g04674 435 MobiDBLite consensus disorder prediction 20 34 - -
Vivi6g04674 435 MobiDBLite consensus disorder prediction 1 35 - -
Vivi6g04674 435 Gene3D - 99 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04674 Vivi-Chr6 149340383 149346548 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04674 K11324 - gmx:100818926 717.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04674 6 149340383 149346548 Vivi6g04674 6 149340383 149346548 ECH