Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04671 ATGGCGACTCTAACCACAATTTGTTCCATAACAACAAAATCAAGTTTCAGTAACCAACAAAAACAACACAACCACCACGCCAACAATCTCAATTTCACAAACCGAAATCATAACTCAAGAAATTCAAACACAGTAATCCGATTAGCCTCTACCTCCAACCAGAACCCGCCATCTCCGGGATTATACTCCGCCAAGATATTCGACCTCACCGCTTCAAACGTCGACCTTGTTCTCGAAGACGTTCGCCCTTACCTCATCTCCGACGGAGGAAACGTCGATGTCGTATCCGTCGAAAACGGCGTCGTTTCTCTTAAGCTACAAGGAGCTTGCGAAAGTTGTCCTAGCTCAACCACAACGATGAAGATGGGAATCGAACGCGTTCTTAAGGAAAAATTCGGAGATTCCATCAAAGATATCGTTCAGGTTTTCGATGAAGATCAATCAAAGGAAACAACCGTTGAGGCGGTGAATAATCATTTGGAGATATTGAGACCGGCGATAAAGAACTACGGCGGTAGCGTGGAGGTGTTATCGGTTGAAGGTGGTGATTGTGTTGTGGAGTATGTTGGACCTGAGTCTATTGGATCAGGAGTAAAAGCTGCAATCAAGGAGAAGTTTCCGGATATTCTCAATGTTACATTCTCCACCTAG 651 0.4455 MATLTTICSITTKSSFSNQQKQHNHHANNLNFTNRNHNSRNSNTVIRLASTSNQNPPSPGLYSAKIFDLTASNVDLVLEDVRPYLISDGGNVDVVSVENGVVSLKLQGACESCPSSTTTMKMGIERVLKEKFGDSIKDIVQVFDEDQSKETTVEAVNNHLEILRPAIKNYGGSVEVLSVEGGDCVVEYVGPESIGSGVKAAIKEKFPDILNVTFST 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04671 216 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 148 213 IPR034904 -
Vivi6g04671 216 FunFam NifU-like protein 3, chloroplastic 66 149 - -
Vivi6g04671 216 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 72 144 IPR034904 -
Vivi6g04671 216 Gene3D - 151 214 IPR034904 -
Vivi6g04671 216 Gene3D - 66 150 IPR034904 -
Vivi6g04671 216 Pfam NifU-like domain 75 135 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vivi6g04671 216 MobiDBLite consensus disorder prediction 15 39 - -
Vivi6g04671 216 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 67 214 - -
Vivi6g04671 216 FunFam NifU-like protein 1 chloroplastic 151 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04671 Vivi-Chr6 149333883 149334927 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04671 K22074 - qsa:O6P43_010887 258.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04671 6 149333883 149334927 Vivi6g04671 6 149333883 149334927 ECH