Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04667 ATGGCCAATATCCCCGATCCAGACAACGATGACGATTTTCGCGATCTCTACAAAGAGTACACCGGTCCCCTAGGATCTGGATCTGCTCAAGAGAAAGCAAAATCAAACAAAAGGTCCAATGCTGGTTCTGACGAAGAGGATGAAGTTCGTGACCCTAATGCTATCCCAACTGGTTTCATCAGCCGTGATGCTAAGGTCTGGGAAGCTAAATCGAAAGCTACTGAGAGAAATTGGAAGAAGAGAAAAGAAGAAGAGATGATTTGTAAACTCTGTGGTGAATCAGGTCATTTCACTCAGGGATGTCCGTCTACTCTTGGAGCAAATCATAAGTCTCAAGAATTATTTCAAAGGATACCTGCAAGAGACAAAAATGTAAGAGCACTTTTCACTGAGAAAGTTATAACTAAGATTGAAAGGGATATTGGCTGCAAAATTAAGATGGACGAGAAATTCATTATTGTTAGCAGTAAGGATAGGTTAGTTATGGCTAAAGGAGTTGATGCTGTGCATAAGATAAGAGAGGAAGGTGAACAAAAAGGATCTTCTAGTTCTCACATGAACCGATCAAGGTCACCGCCGCCTCAGCGATCAAGGTCACCACCACCTCAGAGAAGTCCTGTCAATGCCCGGTTTCAGCGTTCTGAGCCTCAGAGATCCCATTCTACACCACGGACTGCACCCCAGTTTCAGCAGAGGTTTGGCAGGCAAGAGAGGGCTGTTGATGACCGTGTTCGAGAGGATAGTCAAAAGTTTTCAAGAGATTCTCCACAAGCTTATGGGAATAGTGGACCTAGAAGTCATTCAAGCCGGTCAAGATCTCCAAGACAAGCAGCCCCGCATGCAGGAAATTCTTATAATTCATTTGATGGGCGAAATCATAACATGAGCACTTTCAGGAATGATGGTTGGGATTCTCATAGGAGAGAGTCTGGTATCCAACCTGGTCAACAGTTTGACCACAACGCTTCACCTAAGACTCTTGAAGAATTAGAGTTGGAGTATAAAAAGGAGGCAATGGAGCTAATGAAAATCCGTGACAGAGAAGAAGATGAAGAAAACTTCAAACACCGTGAGGCTATTAAAGATTTGAGGGAGAAGTACATGAACAAAGTTGCTTTGGTGAGTGTCACACACACAAAACAATGGGATGAGTTTTTTAAGCTTGATGCCCTGAGGCGTCAACAACAGGCAATCCAACAAATGTCTCCTGGGTATCGTGGTTATAAACAGCAGAATTTTGCTGACTATGATAGATCCCCTGTCAATCCTCCCTATGGTGGAACCAATATACCTTTGGAATCAAGGAACAGGTTCTCAAACAGTACCGAGCCTTATCCTAACAGGCCTCATGATAATTTTGGGGAATTTCATAGGCGTGGAGATTTTGCAAAAGCTTACAACCGATATTAA 1410 0.4319 MANIPDPDNDDDFRDLYKEYTGPLGSGSAQEKAKSNKRSNAGSDEEDEVRDPNAIPTGFISRDAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANHKSQELFQRIPARDKNVRALFTEKVITKIERDIGCKIKMDEKFIIVSSKDRLVMAKGVDAVHKIREEGEQKGSSSSHMNRSRSPPPQRSRSPPPQRSPVNARFQRSEPQRSHSTPRTAPQFQQRFGRQERAVDDRVREDSQKFSRDSPQAYGNSGPRSHSSRSRSPRQAAPHAGNSYNSFDGRNHNMSTFRNDGWDSHRRESGIQPGQQFDHNASPKTLEELELEYKKEAMELMKIRDREEDEENFKHREAIKDLREKYMNKVALVSVTHTKQWDEFFKLDALRRQQQAIQQMSPGYRGYKQQNFADYDRSPVNPPYGGTNIPLESRNRFSNSTEPYPNRPHDNFGEFHRRGDFAKAYNRY 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04667 469 Coils Coil 462 469 - -
Vivi6g04667 469 MobiDBLite consensus disorder prediction 37 52 - -
Vivi6g04667 469 MobiDBLite consensus disorder prediction 202 232 - -
Vivi6g04667 469 ProSiteProfiles Zinc finger CCHC-type profile. 88 103 IPR001878 GO:0003676|GO:0008270
Vivi6g04667 469 MobiDBLite consensus disorder prediction 235 252 - -
Vivi6g04667 469 SUPERFAMILY Retrovirus zinc finger-like domains 75 107 IPR036875 GO:0003676|GO:0008270
Vivi6g04667 469 Coils Coil 327 347 - -
Vivi6g04667 469 MobiDBLite consensus disorder prediction 174 324 - -
Vivi6g04667 469 PANTHER OS01G0252900 PROTEIN 1 469 - -
Vivi6g04667 469 MobiDBLite consensus disorder prediction 253 299 - -
Vivi6g04667 469 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04667 Vivi-Chr6 149304908 149308405 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04667 - - gmx:100806099 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04667 6 149304908 149308405 Vivi6g04667 6 149304908 149308405 ECH