Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04656 ATGGCTCCACCCTTGAACTCCCCCACCCTTGATCACTTCAAAAATGTGTCCATATTTGATTTATCTGAAACAAAGTTTAACGTGAAAGGTGTTCCTTTGTTCCATGATGTTCCTGAAAATGTTTCTTTCAGCTCATTTTCTTCTATATGCAAACCTTCTGAATCAAATGCACCACCTTCACTTATTCAAAAAGTTCTTTCCTTTTCACACAAAGGTGGTTTCTTTGGATTCTCTCATAAAACACCATCAGATAGATTGATGAATTCCTTAGGCAGTTTCAATGGAAAAGACTTTTTGAGTATTTTCAGGTTCAAAACATGGTGGTCTACTCAATGGATAGGGAAATCTGGTTCTGATTTACAAATGGAAACTCAATGGATTCTCATTGAAGTTCCTGAAACCAAGTCCTATGTTGTAATCATTCCTATAATAGAAAAAAGTTTCAGGTCTGCACTTTTTCCTGGTTTTCATGATCATGTCATGATTGGTGCTGAAAGTGGTTCAACAAAGGTGAAAGAATCAACTTTCAACTCAATTGCTTATGTTCATTTTTCTGAAAATCCTTATGATTTGATGAAAGAAGCTTATAGTGTTATAAGGGTTCATCTCAATAGTTTTAGACTATTGGAAGAGAAAAATGTCCCAAATTTAGTTGATAAATTTGGTTGGTGCACATGGGATGCTTTCTATTTGACTGTTAATCCTATTGGTGTTTTCCATGGTCTTGATGATTTCTCGAAAGGCGGTGTCGAGCCGAGGTTTGTTATCATTGATGATGGATGGCAAAGCATTAGTTTTGATGGTAGTGATCCTAATGAAGATGCAAAGAATCTTGTTCTTGGTGGTGAACAAATGACTGGTAGACTTCATAGGTTTGATGAATGTTACAAGTTTAGAAAATATGAAAGTGGGTTGTTATTAGGCCCTAATTCACCTCCTTATGATCCAAAGAATTTTAGGGATTTGATTCTAAAGGGTATTGAACATGAGAAATTGGAGCAGGAGGCTATTTTATCTAAGAGTTCTGATTTGGCTGAAATAGAGTCAAAGATCAAGGAAGTAGTAAAGGAAATTGATGATCTCTTTGGTAGAGACCAATATAGCAGTATTGAAAAAAGTGAGGTGGAGAGTGAGTGTGGTTTGAAGGCTTTCACAAAGGATTTGAGGACTAAGTTCAAAGGTTTGGATGATGTTTATGTTTGGCATGCATTATGTGGTGCTTGGGGTGGTGTGAGGCCAGAAACCACACACCTTAATAGCAAAATTGTCCCTTGCAAAACCTCACCTGGTCTTGATGGAACAATGGAGGATCTTGCAGTGGTTAGGATTGTCAAAGCTTCAATTGGGCTAGTTCATCCTAGTCAAGCTTATGAACTTTATGACTCCATGCATTCTTATCTTGCTGAATCCGGTATCACAGGAGTCAAAGTTGATGTCATTCATTCTCTTGAATATGTTTGTGAGGAATATGGAGGTAGAGTTGATCTTGCAAAAACTTACTATGAAGGATTGACAAAATCCATTGTCAAGAACTTTAATGGAAATGGAATGATTGCTAGTATGCAGCATTGCAATGACTTTTTCTTTCTTGGAACAAAGCAAGTTTCTATGGGAAGAGTTGGGGATGATTTTTGGTTCCAAGATCCAAATGGTGATCCAATGGGAAGTTTTTGGCTACAAGGTGTACACATGATTCATTGTTCCTACAATAGTTTATGGATGGGACAAATGATTCAGCCTGATTGGGATATGTTTCAATCAGATCATGTTTGTGCTAAATTTCATGCTGGCTCAAGAGCTATATGTGGTGGGCCAGTTTATGTTAGTGATAATGTTGGCTCTCATGATTTTGATTTGATTAAGAAGCTTGTGTTCCCTGATGGTACAATCCCAAAATGCATATATTTTCCACTTCCAACTAGAGACTGTCTTTTCAAAAACCCTCTATTTGACAGTAAAACTGTACTCAAAATTTGGAACTTCAACAAGTATGGAGGGGTGATTGGAGCTTTCAACTGTCAAGGGGCAGGATGGGATCCAATAATTCAGAAATTTAGGGGCTTCCCTGAATGCTACAAGCCAATAACCGGTACTGTTCATGTAACTGAAGTTGAATGGGATCAAAAGGAAGAAACATCTCATTTGGGTAAAGCAGAAGAATATGTAGTCTACTTGAATCAAGCTGATGAACTTTGTTTGATGACTCCAAAATCTGAACCAATTCAGTTTACTATCCAACCTTCCACATTTGAGCTATACAGTTTTGTTCCAGTTACAAAGTTATCTGGCAGCATTAAATTTGCACCAATTGGGTTGACAAACATGTTCAATAGTGGTGGAACAATTCTTGATTTGGAATATGTTGAAAATGGTGCTAAGATTAAAGTTAAAGGTGGTGGGAGTTTTCTTGCTTATTCTAGTGAATCACCAAAGAAGTTTGTAGTGAATGGTTGTGATGTGGATTTTGAGTGGCTAGGTGATGGAAAATTGTGTGTCAATGTTTCTTGGGTTGAAGAGGCTTGTGGTGTTTCTGATTTGGAAATTTTCTTTTGA 2553 0.3717 MAPPLNSPTLDHFKNVSIFDLSETKFNVKGVPLFHDVPENVSFSSFSSICKPSESNAPPSLIQKVLSFSHKGGFFGFSHKTPSDRLMNSLGSFNGKDFLSIFRFKTWWSTQWIGKSGSDLQMETQWILIEVPETKSYVVIIPIIEKSFRSALFPGFHDHVMIGAESGSTKVKESTFNSIAYVHFSENPYDLMKEAYSVIRVHLNSFRLLEEKNVPNLVDKFGWCTWDAFYLTVNPIGVFHGLDDFSKGGVEPRFVIIDDGWQSISFDGSDPNEDAKNLVLGGEQMTGRLHRFDECYKFRKYESGLLLGPNSPPYDPKNFRDLILKGIEHEKLEQEAILSKSSDLAEIESKIKEVVKEIDDLFGRDQYSSIEKSEVESECGLKAFTKDLRTKFKGLDDVYVWHALCGAWGGVRPETTHLNSKIVPCKTSPGLDGTMEDLAVVRIVKASIGLVHPSQAYELYDSMHSYLAESGITGVKVDVIHSLEYVCEEYGGRVDLAKTYYEGLTKSIVKNFNGNGMIASMQHCNDFFFLGTKQVSMGRVGDDFWFQDPNGDPMGSFWLQGVHMIHCSYNSLWMGQMIQPDWDMFQSDHVCAKFHAGSRAICGGPVYVSDNVGSHDFDLIKKLVFPDGTIPKCIYFPLPTRDCLFKNPLFDSKTVLKIWNFNKYGGVIGAFNCQGAGWDPIIQKFRGFPECYKPITGTVHVTEVEWDQKEETSHLGKAEEYVVYLNQADELCLMTPKSEPIQFTIQPSTFELYSFVPVTKLSGSIKFAPIGLTNMFNSGGTILDLEYVENGAKIKVKGGGSFLAYSSESPKKFVVNGCDVDFEWLGDGKLCVNVSWVEEACGVSDLEIFF 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04656 850 PANTHER - 19 839 IPR008811 -
Vivi6g04656 850 SUPERFAMILY (Trans)glycosidases 217 268 IPR017853 -
Vivi6g04656 850 SUPERFAMILY (Trans)glycosidases 357 623 IPR017853 -
Vivi6g04656 850 Coils Coil 344 364 - -
Vivi6g04656 850 Pfam Raffinose synthase or seed imbibition protein Sip1 20 833 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04656 Vivi-Chr6 149134747 149138284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04656 2 850 Glycoside Hydrolase AT4G01970 56.532 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04656 K06611 - gmx:100815922 1357.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04656 6 149134747 149138284 Vivi6g04656 6 149134747 149138284 ECH