Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04653 ATGTCGATCGGCGACGCTTTTCTACTCTTACTATTCGTCGCTACTTATTCCATTTCACTTGCTTCCGCCGATTCCATCTATGGCTGCGGCGGATTCGTCCAGGCGAGCTCATCATTGGTGAAATCTAGGAAACAAACCGATGCAAAATTGGATTATTCACATGTCACGGTTGAGCTTCAAACAGTGGATGGACTGGTAAAGGATAGAACACAATGTGCTCCAAATGGATACTATTTTATTCCAGTATATGACAAGGGTTCCTTTGTTATTAAAGTCAATGGACCTGATGGGTGGTCATGGGATCCTGAAAAGGTTCCCGTGGCAGTTGACAATCAAGGTTGCAATGGGAATGAAGATATAAATTTTCGTTTCACAGGGTTCTCTATATCTGGTAGAGTCGTGGGAGCTGCAGGTGGAGAAAGCTGTTCGGTTAAAAATGGAGGTCCTTCAAATGTAAAAGTTGAACTATTGTCTCCTTCTGGAGATCTTGTTTCATCAGTCTTGACTTCACCATCAGGGAGCTACTTGTTTACGAACGTAATTCCAGGAAAATATGAGCTACGAGCTTCAAATCCTGATATCAAAGTCGAAGTTAAAGGTTCCGTGCAGGTGGAATTGGGCTTTGGAAATGGGGTGATTGATGATATTTTCTTTGTCCCTGGCTATAGTATCAGCGGGTCTGTTGTTGCACAGGGAAACCCAATATTAGGAGTCCATATCTTCTTATATTCAAAGGATGTATCTGAGATAAAATGTTTGCAAGGTTCTGCTCATGGTCCACGACAAGAAGCAGCTCTATGTCATGCTGTAACAGATGCAGACGGAAAGTTCTCATTCAATTCAATACCTTGTGGAAGTTATGAACTAGTTCCCTACTACAAGGGTGAAAATACAGTATTTGATGTTTCACCATCTAGTGTCCCAGTTAATGTTAAGCATCAGCACGTAACAGTGCCTCAAAAATTTCAGGTCACTGGATTTTCTGTTGGAGGCCGTGTAGTTGATGGAAATGACATGGGAGTGGAGGGTGTTAAGGTCATAGTTGATGGTCATGAAAGGTCTATTACTGACAATCAAGGATATTACAAGCTTGATCAGGTTACATCAACACACTATACCATAGAAGCCCGAAAGGAGCATTACAAATTCAAGAAGTTGGAGAACTATATGGTATTGCCAAATATGGCTTCAATAGAAGATATTGTTGCTGTTTCATATGATATTTGTGGTTTGGTTAGGATGGTTAGTAGCAGTCAGAAAGCAACGGTGGCTTTGACTCACGGACCTGATAATGTGAAACCACAAAAGAAACAAACGGATGGAAATGGAAATTTCTGCTTTGAGGTTATTCCTGGTGAATATCGCTTGTCAGCTATTGCTGCTACTCCGGATAATGCTGCCGGACTCATGTTTGTTCCATCTTATATCGATGTTGCGATCAAAAGTCCATTATTGAATGTTGAATTTTCACAGGCTCTGGTCAATGTCCGTGGTGCCGTAGTCTGCAAGGAAGAATGCGATCCATCTGTATCTGTGACTCTTGTGAGGCAGGGTGCTAAACATAATGAAGCGAGAAAGACAATTAGCTTGACCTCCGAGAGTAGTGAATTTCTGTTTTCTGATGTTATTCCTGGAAAATACAGGCTTGAGGTGAAACATAGTTCCCCTGAATCAGTGGCCAAGGAAGATAATTGGTGCTGGGAGAAGAGCTTCATAGATGTAAATATTGGAGCTGAGGACTTGGAAGGAATTGTTTTTGTTCAAAAAGGTTACTGGGTCAATGTGATCTCCACTCATGAAGTTAATGGTTACATAACTCAACCTGATGGGTCAACTGTGAATTTAAAGATTCAGAAAGGTTCCCAGCATATATGTGTTGAATTTCCCGGAATACATGAATTTAGTTTTATTGACTCATGCATCTTCTTTGGGAGCTCACCTGTGAAAATTGACACATCGAGTCTATTGCCCATTCATCTAAAAGGAGAAAAACATCTTATTAAAGGACAAATAAATGTGCATTCCGGCTTACATGATGCACTGCCTGAGAAAATAGTGGTTGATATTTCTCGCGATGGAGCCGACGTTGCTGATAATGCCATGGCCATACTCAAGTCCCACGGGAAAGATCAAATATCTATCTTTGAGTATTCTCTTTGGGCCAATCCAGGAGAAAAGCTTACCTTTGTTCCTCGGGACTCAAGGAATGATGGAGATAAAAAGCTTTTATTTTATCCTATAGAACAGCATGTATCAGTGACAGATGATAATTGTCAAGCATATATTCCTACATTTTCTTGCCGACTGGGTGTATATATTGAAGGAACAGTCTCGCCTCCTCTTTCTGGTGTTCATATCAGGATTTTCGCTGCCGGAGACAGCAATGTCACTGGACTTAAAAGTGGGGAACTAATACTTGAAACAACTACTGGTACTGATGGCTCCTATGTGGCAGGTCCGCTGTATGATGATGTTGGTTATACTGTTCAGGCTTCAAAGTCTGGCTATCATTTAAAACAAGTTGGGCCTCATTCCTTTAGTTGTCAGAAGCTTGGTCAGATTTCAGTACATATACATCATAAAGACAATGATAAAGAGCTCATTCCTTCAGTTCTGTTATCTTTGAGTGGTGATAATGGTTATAGAAACAACTCCGTATCTGGGGCTGGAGGGGCATTCCTGTTTGATAGTTTGTTTCCTGGAATGTTCTATTTGCGTCCTGTTTTAAAGGAATATGCTTTCTCACCTCCAGCACAGGCAATAGAACTTGAATCAGGGGAGTTTAGAGAAGTTGTTTTCCAGGCCACACGAGTAGCTTACAGTGCTATTGGTGTAGTCTCTTTGTTATCTGGCCAACCCAAAGGAGGAGTTTCAGTTGAAGCCCGGTCAGTGTCAAAAGGCTATTTTGAGGAAACTGTAACTGATTCCTCTGGGAATTATCGTCTTAGAGGACTGCTGCCTGATACTGTCTATGAAGTCAAAGTAGCTAAAAGGGATGTTACAGGAAGTTCTAATATAGAGCGTGCATCTCCAGATTCGATTTCTGTCAAGGTTGGAACTGAGGATATCAATGGTTTGGATTTTATAGTTTTTGAGGAGCCAGAAATGACAATTGTAAGTTGTCATGTTGAAGGAAATGGTACGGATGAACTTCGTAAACATCTGATGGTAGAAATCAGGTCTGCTAGTGAGATAAGCAAGATAGAGTCAGTCTTCCCCCTGCCAATTTCTAACTTCTTCCAAGTTAAGGGCTTATCAAAGGGCAGACACCTTCTTCAGCTTCGATCTGGTCTCCCATCAAGTTCACTTAGATTTGAATCTGATATAATTGAGGTCGACTTGGACAAAAATATTCAAATCCACGTGGGACCATTGAAATTCAGGATTGAAGATCAGCTGAAGCAGGAGTTGACTCCGGCACCAGTATTCCCCCTCATAGTTGCATTTCTAGTTGTTGCACTATTTATCAGCATCCCTAGATTGAATGATTTGTATCAAGCCACAATAGACATACCCGCGCCAGGAACCACAACGACTTCAAGAAAAGACGCGAGGAAGCCAATGTTGCGTAAGAAGACTTTTTAA 3585 0.4131 MSIGDAFLLLLFVATYSISLASADSIYGCGGFVQASSSLVKSRKQTDAKLDYSHVTVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKVNGPDGWSWDPEKVPVAVDNQGCNGNEDINFRFTGFSISGRVVGAAGGESCSVKNGGPSNVKVELLSPSGDLVSSVLTSPSGSYLFTNVIPGKYELRASNPDIKVEVKGSVQVELGFGNGVIDDIFFVPGYSISGSVVAQGNPILGVHIFLYSKDVSEIKCLQGSAHGPRQEAALCHAVTDADGKFSFNSIPCGSYELVPYYKGENTVFDVSPSSVPVNVKHQHVTVPQKFQVTGFSVGGRVVDGNDMGVEGVKVIVDGHERSITDNQGYYKLDQVTSTHYTIEARKEHYKFKKLENYMVLPNMASIEDIVAVSYDICGLVRMVSSSQKATVALTHGPDNVKPQKKQTDGNGNFCFEVIPGEYRLSAIAATPDNAAGLMFVPSYIDVAIKSPLLNVEFSQALVNVRGAVVCKEECDPSVSVTLVRQGAKHNEARKTISLTSESSEFLFSDVIPGKYRLEVKHSSPESVAKEDNWCWEKSFIDVNIGAEDLEGIVFVQKGYWVNVISTHEVNGYITQPDGSTVNLKIQKGSQHICVEFPGIHEFSFIDSCIFFGSSPVKIDTSSLLPIHLKGEKHLIKGQINVHSGLHDALPEKIVVDISRDGADVADNAMAILKSHGKDQISIFEYSLWANPGEKLTFVPRDSRNDGDKKLLFYPIEQHVSVTDDNCQAYIPTFSCRLGVYIEGTVSPPLSGVHIRIFAAGDSNVTGLKSGELILETTTGTDGSYVAGPLYDDVGYTVQASKSGYHLKQVGPHSFSCQKLGQISVHIHHKDNDKELIPSVLLSLSGDNGYRNNSVSGAGGAFLFDSLFPGMFYLRPVLKEYAFSPPAQAIELESGEFREVVFQATRVAYSAIGVVSLLSGQPKGGVSVEARSVSKGYFEETVTDSSGNYRLRGLLPDTVYEVKVAKRDVTGSSNIERASPDSISVKVGTEDINGLDFIVFEEPEMTIVSCHVEGNGTDELRKHLMVEIRSASEISKIESVFPLPISNFFQVKGLSKGRHLLQLRSGLPSSSLRFESDIIEVDLDKNIQIHVGPLKFRIEDQLKQELTPAPVFPLIVAFLVVALFISIPRLNDLYQATIDIPAPGTTTTSRKDARKPMLRKKTF 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04653 1194 SUPERFAMILY Cna protein B-type domain 129 197 - -
Vivi6g04653 1194 Gene3D - 331 405 - -
Vivi6g04653 1194 SUPERFAMILY Starch-binding domain-like 219 302 IPR013784 GO:0030246
Vivi6g04653 1194 PANTHER CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING 22 1182 - -
Vivi6g04653 1194 MobiDBLite consensus disorder prediction 1175 1194 - -
Vivi6g04653 1194 FunFam Carbohydrate-binding-like fold 143 215 - -
Vivi6g04653 1194 FunFam Carbohydrate-binding-like fold 328 402 - -
Vivi6g04653 1194 SUPERFAMILY Carboxypeptidase regulatory domain-like 327 394 IPR008969 -
Vivi6g04653 1194 SUPERFAMILY Cna protein B-type domain 861 921 - -
Vivi6g04653 1194 Gene3D Immunoglobulins 141 216 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04653 Vivi-Chr6 149046701 149063987 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04653 K26500 - gmx:100794049 2065.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04653 6 149046701 149063987 Vivi6g04653 6 149046701 149063987 ECH