Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04648 ATGGAAGATTTAGGATCTACCCGGTTTGATGGTATCAGCAATGCTGTGAGGAGGAAGAGAAGCCAAACTTCGCGCAGGCCGCGGCCTGATTCGCAGCCTGTTGTTGATGATTTGACTCCTTCATCAACACCTCCTTCAGACAGTCCTGACAAGGCGTCTAGCGATGAGAATGATGGTTATGTTAATACTGGTTCCAAGAGGAAAGAATTTAATCTCAACCATTGTGTTACTCAGCCCTCGCCGGCTGTTGGACGGGGTGGTTTGCATAATAGACGGAGTAGTGAAGGTGTTCTTGCTCCCGCTAATTGGAAAGGCTCGAGTAGTAAATTCAAGGATGGGCTTGATTCAGAGTCGAAAAATGCTGATGTATATGGTGGGAGGAATACTGAGGGGAGTAGTTTGGGTCAGTTTGGTGTTTCTCAGGATGGATTAGGGAACGAGAATAGGGTTAAGAAGGTTAAACTCAAGGTTGGTGGTGTGACGCGTACTATACAAGCTAACTCTGCTTCTAATAGTGCTTCCGGAAGTGGATCAACTTCAAAAAGCTCTCGTTTATCGGACGCCTCCAGACCGCGCCAAAAGCAACAGAGTAATTCAGACGATAATATTTCTCCGTCTGATAAGAGGCGCAGCCTCCAAGGCCTTCCGTGGAAGGATTTCAAAAGGGGTGGTTTTGGTCTTGGGAAGGAGGAATCTTCGATGGGGAAGATATCTGGAAAGAACACGTCTAGCAAGCAAGCAGACAAGTCTGAACCTGTTCGTAAGAGCAAGAGAGTACCCAAGAGACGTGTCCTGGATGGGGAATTCGATGATGACGACGATGCTGATGATGAGATTCGGTACTTGGAAAAGCTGAAAATATCAAAAGTTTCTGCAGTATACAAAGATGAAGAAGAATTAAGCAAGAAACATCGAAGACTCTCTAGCGTCTCTAATATGGACAACTCCGCCTCAACAAGGTCAGGCAAAGATGGAAAGAAAAGGTCTAGATCTGATAAAATGCTTGTAGATACAGATTATGAGGGTGAAGAGGAGTCAGGGTCTGATGGAGAGCTCGAGGATAAGAAAAAGAAAAAGCAGAGGAAAGAATCTGTTGATGTATTGATGGACACTAAGAGAGAAATGACTCTTACAACGCGTCAACGGGCCCTTCAATCAAGCAAAGATACTTCTACATCTAATGCGAGTTTAATTGAGTTTCCCAACGGATTACCTCCTGCCCCGCCTAGAAAGCAAAAAGAGAAGCCTACGGAAGAGGAGCTGCTATCAAAGAAAACTGAGGCTGCCAATAGACGTAAAATGCAAGTTGAGAAGGCTGCGAGGGAATCTGAGGCTGAAGCTATCAGAAAAATTCTTGGGCAAGACTCCAGCAGAAAAAAGCGAGAGGATAAAATAAAGAAGCGCCAAGAAGAACTGGCACAGGAAAAGGCAGCCAACGCAGAAAAACTTGCTTCAAATACCATCAGATATGTGATGAGTCCTACTGGAACAACATTGACTTTTCCTGATGAAATGGGGATCCCTCCGATTTTAAACTCTAAACCCATCAGTTATCCTCCACCTCGTGAGAAGTGTGCTGGTCCATCATGTACAAATCCATACAAATACCGGGATTCAAAAACCAAGCTTCCTCTTTGCAGTCTCCAATGCTACAAGGCTGTTCAGGAGAAAACTACAGCTGAAACAATCTGCTAA 1695 0.4478 MEDLGSTRFDGISNAVRRKRSQTSRRPRPDSQPVVDDLTPSSTPPSDSPDKASSDENDGYVNTGSKRKEFNLNHCVTQPSPAVGRGGLHNRRSSEGVLAPANWKGSSSKFKDGLDSESKNADVYGGRNTEGSSLGQFGVSQDGLGNENRVKKVKLKVGGVTRTIQANSASNSASGSGSTSKSSRLSDASRPRQKQQSNSDDNISPSDKRRSLQGLPWKDFKRGGFGLGKEESSMGKISGKNTSSKQADKSEPVRKSKRVPKRRVLDGEFDDDDDADDEIRYLEKLKISKVSAVYKDEEELSKKHRRLSSVSNMDNSASTRSGKDGKKRSRSDKMLVDTDYEGEEESGSDGELEDKKKKKQRKESVDVLMDTKREMTLTTRQRALQSSKDTSTSNASLIEFPNGLPPAPPRKQKEKPTEEELLSKKTEAANRRKMQVEKAARESEAEAIRKILGQDSSRKKREDKIKKRQEELAQEKAANAEKLASNTIRYVMSPTGTTLTFPDEMGIPPILNSKPISYPPPREKCAGPSCTNPYKYRDSKTKLPLCSLQCYKAVQEKTTAETIC 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04648 564 MobiDBLite consensus disorder prediction 320 337 - -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 122 143 - -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 293 309 - -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 161 202 - -
Vivi6g04648 564 SMART PAPA_1_2 420 505 IPR006880 GO:0031011
Vivi6g04648 564 MobiDBLite consensus disorder prediction 1 275 - -
Vivi6g04648 564 Coils Coil 426 446 - -
Vivi6g04648 564 Coils Coil 458 486 - -
Vivi6g04648 564 PANTHER INO80 COMPLEX SUBUNIT B 10 560 IPR029523 GO:0006338|GO:0031011
Vivi6g04648 564 Pfam PAPA-1-like conserved region 420 505 IPR006880 GO:0031011
Vivi6g04648 564 Pfam HIT zinc finger 521 552 IPR007529 -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 411 477 - -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 349 377 - -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 247 268 - -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 35 78 - -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 293 478 - -
Vivi6g04648 564 MobiDBLite consensus disorder prediction 378 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04648 Vivi-Chr6 148990864 148994733 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04648 - - vvo:131610438 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04648 6 148990864 148994733 Vivi6g04648 6 148990864 148994733 ECH