Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04606 ATGGCTCTCACATTCTCACTCTCACCTTTCATCACTCTCTTCTTCCTCCTCCTCCTCCACCACACATGCCACTCACGTGACTCCTTCGCGTGCGATCCAAAATCCACTTCAACAAACAACCTCCCATTCTGCAATGTCAAACTCACCATTCAACAGAGAGTGAACGATCTCATTGGAAGATTAACGCTTCCAGAGAAAGTTAACCTGTTAGTCAACAATGCCGCCGCGGTTCCGAGAATCGGAATCAAAGGCTATGAGTGGTGGTCGGAGGCACTTCACGGTGTTTCAAACGTCGGTCCCGGAACCAGATTCGGTGGTGTGTTTCCCGGTGCGACTAGCTTTCCGCAAGTCATCACAACCGCTGCTTCTTTTAATGCTTCTCTTTGGGAAGCAATCGGACGGGTTGTCTCGGACGAAGCAAGAGCAATGTACAATGGAGGAGCAGCAGGGTTAACATATTGGAGTCCAAATGTGAATATTTTCAGAGACCCTAGGTGGGGTCGTGGACAGGAAACTCCCGGTGAAGATCCTGTGTTAGCCGGTATTTATGCTGCTAGATATGTGAAAGGGTTACAGGGAACAGACGGTAACAAGTTGAAAGTTGCTGCTTGTTGTAAACACTTCACTGCTTATGATATTGATAATTGGAATGGTGTGGATCGCTTTCACTTTAATGCACAGGTGAGTAAGCAAGACATAGAAGACACATTTGATGTGCCATTTAGGATGTGTGTGAAGGAAGGGAATGTAGCTAGTGTGATGTGTTCTTACAACCAAGTCAATGGTGTCCCTACATGTGCTGACCCCAATCTCCTAAAGAAGACAGTTCGTGGCCAATGGGGTCTTGATGGGTACATTGTATCTGATTGTGACTCTGTCGGAGTTTTCTTCAATAGCCAACATTATACATCAACGCCAGAAGAAGCTGCTGCTGATGCCATCAAAGCAGGTTTGGATTTAGATTGTGGGCCTTTCCTAGGAATACACACACAGGATGCGGTTAAAAAAGGTTTGTTAACCGAAGCACATGTTAATGGTGCTTTGGTGAATACACTGACAGTGCAAATGAGATTAGGGATGTTTGATGGAGAGCCATCAGCTCATGCTTATGGCAACTTAGGCCCGAAAGATGTATGTAAACCAGCTCACCAAGAGCTTGCACTTGAAGCTGCTAGACAAGGAATTGTGCTTCTCAAAAACACTGGTCCATCTTTGCCTCTTTCCTCACAAAAACACAAAACTGTGGCTGTCATTGGGCCCAATTCTAATGTCACAGTTACCATGATTGGAAACTATGCCGGTATTGCATGTGGATATACCAGTCCCTTACAAGGAATAGGAAGATATGCTAAAACTATTCATCAGCAGGGTTGTGCAAATGTTGCATGTAGAGATGATAAAAGTTTTGGGCCTGCCTTAGATGCAGCCCGTAAAGCGGATGCAACTGTTCTAGTTATAGGCTTGGATCAATCTATTGAAGCCGAAACAGTTGATAGAGTTGGCTTGCTTTTGCCTGGACATCAACAAGATCTTGTTTCAAAGGTGGCAGCAGCATCAAAGGGACCAACAATTTTGGTTTTAATGTCTGGTGGGCCTGTTGACATTACTTTCGCAAAGAATGATCCTCGAATCGCTGCCATCTTGTGGGCCGGTTATCCGGGCCAAGCCGGTGGTGCTGCCATTGCTGATATTCTATTTGGAACTGCCGACCCAGGAGGCAAGCTACCTGTGACATGGTACCCACAAGAGTACCTAAAAAACTTGGCCATGACAAATATGGCAATGAGACCAAGCACAGTAGGCTATCCAGGAAGAACATACAGATTCTACAAAGGACCAGTTGTATATCCATTTGGACATGGATTAACATACACACATTTTGTTCACACATTAGCTAGTGCACCCACAATTGTGTCAGTTCCGATTCACGGCCACCGACATGGCAACAACACGAACATTTCAAACAAAGCAATTAGAGTGACACATGCAAGATGTGGCAAACTCTCTATAACCCTTCATGTCGACGTTAAAAACGTTGGATCTAGAGATGGAACACATACATTGTTAGTGTTCTCTGCTCCACCCAATGGTGGTGCCCATTGGGTGCCACAGAAACAGCTTGTGACTTTTGAGAAAGTTCATGTTCCTGCAAAGAGTAAGCAAAGAGTTAGAGTGAATATTCATGTCTGCAAGCTGCTTAGTGTGGTTGATAGATCAGGGATTAGGAGAATCCCAATGGGGGTACATAGTCTTCATATTGGTGATGTTAAACATTCTGTTTCACTTCAAGCAGAAGCACTTGGGATTATCAAGTCTTGA 2319 0.448 MALTFSLSPFITLFFLLLLHHTCHSRDSFACDPKSTSTNNLPFCNVKLTIQQRVNDLIGRLTLPEKVNLLVNNAAAVPRIGIKGYEWWSEALHGVSNVGPGTRFGGVFPGATSFPQVITTAASFNASLWEAIGRVVSDEARAMYNGGAAGLTYWSPNVNIFRDPRWGRGQETPGEDPVLAGIYAARYVKGLQGTDGNKLKVAACCKHFTAYDIDNWNGVDRFHFNAQVSKQDIEDTFDVPFRMCVKEGNVASVMCSYNQVNGVPTCADPNLLKKTVRGQWGLDGYIVSDCDSVGVFFNSQHYTSTPEEAAADAIKAGLDLDCGPFLGIHTQDAVKKGLLTEAHVNGALVNTLTVQMRLGMFDGEPSAHAYGNLGPKDVCKPAHQELALEAARQGIVLLKNTGPSLPLSSQKHKTVAVIGPNSNVTVTMIGNYAGIACGYTSPLQGIGRYAKTIHQQGCANVACRDDKSFGPALDAARKADATVLVIGLDQSIEAETVDRVGLLLPGHQQDLVSKVAAASKGPTILVLMSGGPVDITFAKNDPRIAAILWAGYPGQAGGAAIADILFGTADPGGKLPVTWYPQEYLKNLAMTNMAMRPSTVGYPGRTYRFYKGPVVYPFGHGLTYTHFVHTLASAPTIVSVPIHGHRHGNNTNISNKAIRVTHARCGKLSITLHVDVKNVGSRDGTHTLLVFSAPPNGGAHWVPQKQLVTFEKVHVPAKSKQRVRVNIHVCKLLSVVDRSGIRRIPMGVHSLHIGDVKHSVSLQAEALGIIKS 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04606 772 SMART Fn3_like_2 686 757 IPR026891 -
Vivi6g04606 772 Pfam Glycosyl hydrolase family 3 N terminal domain 107 350 IPR001764 GO:0004553|GO:0005975
Vivi6g04606 772 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 395 627 IPR036881 GO:0004553|GO:0005975
Vivi6g04606 772 PANTHER SUGAR HYDROLASE-RELATED 24 760 IPR044993 GO:0009044|GO:0045493
Vivi6g04606 772 Gene3D - 53 370 IPR036962 GO:0004553|GO:0005975
Vivi6g04606 772 PRINTS Glycosyl hydrolase family 3 signature 114 133 IPR001764 GO:0004553|GO:0005975
Vivi6g04606 772 PRINTS Glycosyl hydrolase family 3 signature 201 217 IPR001764 GO:0004553|GO:0005975
Vivi6g04606 772 PRINTS Glycosyl hydrolase family 3 signature 275 293 IPR001764 GO:0004553|GO:0005975
Vivi6g04606 772 Pfam Fibronectin type III-like domain 687 755 IPR026891 -
Vivi6g04606 772 SUPERFAMILY (Trans)glycosidases 41 394 IPR017853 -
Vivi6g04606 772 FunFam probable beta-D-xylosidase 7 53 367 - -
Vivi6g04606 772 FunFam Probable beta-D-xylosidase 2 649 769 - -
Vivi6g04606 772 Gene3D Immunoglobulins 648 768 IPR013783 -
Vivi6g04606 772 FunFam probable beta-D-xylosidase 2 380 625 - -
Vivi6g04606 772 Gene3D - 381 625 IPR036881 GO:0004553|GO:0005975
Vivi6g04606 772 Pfam Glycosyl hydrolase family 3 C-terminal domain 395 624 IPR002772 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04606 Vivi-Chr6 148122618 148128626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04606 11 772 Glycoside Hydrolase AT1G02640 73.691 0.0 1186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04606 - - gmx:100789316 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04606 6 148122618 148128626 Vivi6g04606 6 148122618 148128626 ECH