Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04582 ATGCAGGGAGCAAAGAAAGCCGGAGAGACCATTAAGGAAACAGCTGCCAACATTGGTGCTTCAGCCAAATCTGGTTTGGAGAAAACCAAGGCCACCCTTCAAGAAAAGACTGAGAAGATGAGTGCACGTGATCCTGTGCAAAAAGAGGCGGCAACCCAAAAGAAAGAGGCAAAGCAGAACCAGGCAGAGCTAGATAAGCAGATGGCGCGTGAAAACAACGCGGCAGTTAAAGAATCCACCACGGCGGCCCAAATGGGTCAGGCCCACCACAACATGGGGACTGGAACCACCACATACCCTACCACGGGGACTTATGGACAACCCATGGGGGGCCACCATAGCACGGGGACTGGAACCAGAACCGGCACGTACCATACGGGGGGCCATGATATGTCAGCCATGCCTGGACATCATACTGACCATGTGACACAGGGAGTTGTGGGCACGCACACTATTGGGACCCATAGAAGCACCGATGGAACTGCTGCGGCGCATAATACTCGTGTTGGTGGAAACCCGAATGCCACAGGGTATACCACTGGTGGTAATTACAAGTAA 558 0.5323 MQGAKKAGETIKETAANIGASAKSGLEKTKATLQEKTEKMSARDPVQKEAATQKKEAKQNQAELDKQMARENNAAVKESTTAAQMGQAHHNMGTGTTTYPTTGTYGQPMGGHHSTGTGTRTGTYHTGGHDMSAMPGHHTDHVTQGVVGTHTIGTHRSTDGTAAAHNTRVGGNPNATGYTTGGNYK 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04582 185 MobiDBLite consensus disorder prediction 73 126 - -
Vivi6g04582 185 Pfam Late embryogenesis abundant (LEA) group 1 9 77 IPR005513 GO:0009793
Vivi6g04582 185 MobiDBLite consensus disorder prediction 29 65 - -
Vivi6g04582 185 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 6-RELATED 10 117 IPR005513 GO:0009793
Vivi6g04582 185 MobiDBLite consensus disorder prediction 155 185 - -
Vivi6g04582 185 Coils Coil 47 74 - -
Vivi6g04582 185 MobiDBLite consensus disorder prediction 1 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04582 Vivi-Chr6 147822047 147823202 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04582 - - psat:127126235 283.493