Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04561 ATGAACCCCACCGGAACACACCCCGTCATCCTCTCTCTTTCTCTTCTCCCACCAATACTAGTTTTTTCGATTCCAAAGATCTGCAACACTCTCCTTCTCTCATTTTCACATGTTTCCTTCTCCTTTTTAGCCATGACGGAACCGCCAACCGATTCATGCACTCCTCCATTGGGTCCCACACCTCCCACGGTGATTCATCCCCGACGCGTGCCGTTCGAACACGGTCTATTGCCTATCCCGCGGCTCATCTTTTCCGACCCCACACAAACCCTAATCTCGTTGAAACAGAAGCTTCTAGAATTATCCTCTAACAATAACCGAGTTGACTCGGCTGCGATTTCTGAGTCGTTGCAGATCTCCGTCGAACTAGCTAGGCTTGTTGTTGAGACTCTCGTTTCGATTCTCCCTGCCGAATCTGAATCTGATAGCGTCGATGTTCATGATCTCGTTTTGTTTCTATACATTCAATCCTACAAGAGGCTCCTCCCGCGGACGCATAAGGATTCCGCCGCTGTAGCGGATGTTTGGCCTTCCACTTCCGCTTTTGATGGATACTTGTCCGCTCTCACGCCGCTTCAGCTTGTGCGGAGCAACAGTAAGCGGTTTACGCCATCGCAAGGTGATGAAGAAGCGCATCAGCTGTCTTATCTGCAAAAGCATTTGGCTAATATTGTGTCTCTACTAGCAGAGCCTGTGGAGGGGGAAAGTGAAGAATCTCTGGTTTTAACCATGGAAAGATTTGAGCACCTTGGTTTTCTATTTCATTATGGTGATAAAGGACTTGAAGGGAATTCATTGAGTCAATCTTCTCCTTTTTTCGCAAACTCGGATCCTAACATGCCTGCTGTTCCCGCTCCCGCTTCCCAAGTTCATGATTGGCTTCTGCAAAATATAGCTTCTGCTTTGGAACGTATTGCTGAACGGACTTCTTCAAAAGAAAATGGTCCAGCTAGTGCCTCTGATCCGGATGTTGCTATGACTGATGCATCTACTGCCTCAGTTAAGGTCTCAACAAGTGCTAGGGGAGCAAGTTTCATCGAAGGGATTTCTAAATCATCATATGCAAAGCATGCATCTGACATTAAAGGGTCCTCTGTTAAGGTTCTAAATTGCCATGAATCTGCCATTTACATCTTAGCTCCTTTGAGATACGCCACCATCTATGGATGTTCAGATGCGACAATAGTTATTGGAGCAGTTGGAAAGGCTGTGAGAGTAGAACACTGTGAACGAGTTCATGTGATTGTTGCAGCAAAACGAATTTGTATTGCTAACTGCCGTGAATGTGTTTTCTTTTTGGGAGTGAACCAGCAACCCCTTATTGTCGGTGATAACCATAAGTTGCAGGTTGCTCCCTATAATACCTTTTACTCCCAGTTGGAGGAACATATGAATGAAGTTGGAGTTCTTCCCACAGTGAATCGTTGGGATGAACCTATAGCATTGGGCATGGTTGATCCCCATGATTCACTATCTCATCCAGCAGGTGTCTCTGATGTTCAAGCTGAGTCTGCTTCTAGGGTGGATCCTGACCAGTTCACTAATTTTGTGATTCCAAACTGGCTTGGAGAGTCCATTGGCTCTACGAAAGACAATCCGTTCACACTACCCGAGGCATATATGGCATCTCAAGAAAGAAATTTAAACAATTTAAGGGAGATAAGGCAACTGTTACGAGATGCATCTTTAGAAGAAAGTCGTAAACGGGAACTGTCATCAGCACTTCATGTGTATTTCAAGGACTGGCTATATGCCTCTGGGAATATTCGTCAGCTTTACTATTTACAAGGAGATTGA 1797 0.453 MNPTGTHPVILSLSLLPPILVFSIPKICNTLLLSFSHVSFSFLAMTEPPTDSCTPPLGPTPPTVIHPRRVPFEHGLLPIPRLIFSDPTQTLISLKQKLLELSSNNNRVDSAAISESLQISVELARLVVETLVSILPAESESDSVDVHDLVLFLYIQSYKRLLPRTHKDSAAVADVWPSTSAFDGYLSALTPLQLVRSNSKRFTPSQGDEEAHQLSYLQKHLANIVSLLAEPVEGESEESLVLTMERFEHLGFLFHYGDKGLEGNSLSQSSPFFANSDPNMPAVPAPASQVHDWLLQNIASALERIAERTSSKENGPASASDPDVAMTDASTASVKVSTSARGASFIEGISKSSYAKHASDIKGSSVKVLNCHESAIYILAPLRYATIYGCSDATIVIGAVGKAVRVEHCERVHVIVAAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYSQLEEHMNEVGVLPTVNRWDEPIALGMVDPHDSLSHPAGVSDVQAESASRVDPDQFTNFVIPNWLGESIGSTKDNPFTLPEAYMASQERNLNNLREIRQLLRDASLEESRKRELSSALHVYFKDWLYASGNIRQLYYLQGD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04561 598 PANTHER UNCHARACTERIZED 62 596 IPR039589 -
Vivi6g04561 598 MobiDBLite consensus disorder prediction 307 326 - -
Vivi6g04561 598 ProSiteProfiles C-CAP/cofactor C-like domain profile. 332 469 IPR017901 -
Vivi6g04561 598 Pfam Tubulin binding cofactor C 363 478 IPR012945 -
Vivi6g04561 598 SMART carp 371 408 IPR006599 -
Vivi6g04561 598 SMART carp 409 443 IPR006599 -
Vivi6g04561 598 Gene3D - 343 503 IPR016098 -
Vivi6g04561 598 Coils Coil 541 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04561 Vivi-Chr6 147535047 147543124 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04561 K16810 - gmx:100801317 926.006
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04561 6 147535047 147543124 Vivi6g04561 6 147535047 147543124 ECH