Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04531 ATGAAAGTTAATGAAGTGAATGATAATCATTCCGTTGATTTGGAGAAAGAGCAAAAAGAAGGGAATGGAGAAGTATCTGACACTGACACAATGAAGGATTCAGTGTCATCTCAAAGTGATTCTTTCACAAATGAAGATGAGAAAGTAGAGAAAGCTTCGAAGGATCTGAAGAGTAAGGTTAAAGGGAATGGTTTAGAAAACAATCGAGGATCGAGGGAGAGATCTGATAGGAAAACAAATAAACTGCAATCGAAGGTGTCTGGTAGCAATCAGAAGAAACCTATAAACTCTAATAAAGGGCCTTCGAGAGTCGCAAATAAAAATACATCAACCAATTCTAAGCCGGCAAAAGTTCCCGTTAAAGTTTCTTCAGTTTCTTCAGAATCTTCTGAAGGAGTTGATGAAAAACCTGTTATAGAAGTCAAGGAAATTGATATCTTGGATGGATCCTCCAATGGTGCTCATAGCGTAGGAAGTGAAGATGAAGGTCGTGTTGAAACCGTTAATGCTGAAGAAAACGGTGAACGTGAGGATGCGGCGGCTATGGAATCGAAAATTAAAGAAATGGAATCCCGAATTGAAAATCTTGAAGAGGAATTGAGAGAAGTTGCTGCTCTTGAGGTGTCACTTTATTCTATTGTACCAGAGCATGGAAGCTCGGCACACAAAGTGCACACACCTGCGCGACGGCTCTCTAGGCTCTATATACATGCTTGCAAGCATTGGACCCCGAAAAGGAAAGCCACGATCGCCAAGAATACTGTTTCTGGCCTTATTTTGGTTGCTAAATCTTGCGGTAATGATGTTTCAAGGTTAACTTTTTGGTTGTCAAACACCATTGTGCTGAGAGAGATAATTTTACAGGCATTTGGGAATTCATGTCAAGTTAGTCCCATTATGAGGTTAGCCGGTTCAAATGGGTCTGCCAAGAGGAATGATGGGAAGTCTGCATCACTGAAATGGAAGGGTATCCCAAATGGTAAATCGGGAAATGGTTTTATGCAGATCGGTGAAGATTGGCAAGAGACTGGAACGTTTACATTTGCCTTAGAAAGAGTAGAATCGTGGATTTTTTCTCGTCTAGTAGAGTCAGTATGGTGGCAGGCTTTGACTCCTCATATGCAATCTTCGGTTGTGGACTCGTGTTCGAATAAATCCTTTGGGAGGCTGCTAGGGCCTGCCTTAGGTGATCACAATCAAGGAAACTTTTCCATCAATCTTTGGAGAAATGCTTTCCAAGATGCGTTTCAAAGACTATGTCCTGTTCGAGCAGGAGGACACGAGTGTGGTTGTTTGCCCGTGATGGCAAGAATGGTCATGGAACAGTGTGTAGATAGACTAGATGTTGCGATGTTCAATGCCATTCTTCGGGAATCAGCCCATGAGATTCCAACTGATCCTATATCAGACCCAATTGTGGATTCCAAGGTTTTGCCAATTCCAGCAGGAAACTTAAGCTTTGGATCTGGTGCACAACTGAAAAATTCTGTTGGCAATTGGTCGAGATTGCTCACCGATATGTTTGGCATTGATGCTGAAGATTGTCTAGAAGAATGTCAGGAGAACGGTGAGAACGACGAAAGACAAGGCGGAGACGGTGAACGTAAATCATTTGCACTCCTTAACGATTTGAGTGACCTTCTAATGCTCCCAAAAGACATGCTTATAGAAAAACAAGTTAGACAAGAGGTTTGTCCATCCATCAGTCTTTCATTGATCATACGCGTCCTTTGTAACTTCACTCCGGACGAGTTCTGTCCGGACCCGGTTCCAGGAACTGTCTTGGAGGCCTTGAATGGAGAGACTTTTGTGGAGCGAAGATTGTCGGCAGAATCCATTAGAAGCTTCCCTTATGCTGCGGCTCCAGTTGCGTATACACCTCCCTCTTCAGCCAATGTGGCGGAGAAAGTTGCAGAGGCAGGAGGAAAGTCTCACCTGACGAGGAATGTATCGGTTGTCCAGAGGAGAGGATATACAAGTGATGAAGAACTCGAGGAACTTGAATCGCCGATCACGGCTATCATTGATAAGGTTCCTTCATCTCCAACAGTTAATACTAATGGAAATGGTAATCACAAAGAGCAAGGGAATCACACTACAACAAATGCTAGATATCAACTACTTCGTGAGGTTTGGTCCTTGTGA 2145 0.4308 MKVNEVNDNHSVDLEKEQKEGNGEVSDTDTMKDSVSSQSDSFTNEDEKVEKASKDLKSKVKGNGLENNRGSRERSDRKTNKLQSKVSGSNQKKPINSNKGPSRVANKNTSTNSKPAKVPVKVSSVSSESSEGVDEKPVIEVKEIDILDGSSNGAHSVGSEDEGRVETVNAEENGEREDAAAMESKIKEMESRIENLEEELREVAALEVSLYSIVPEHGSSAHKVHTPARRLSRLYIHACKHWTPKRKATIAKNTVSGLILVAKSCGNDVSRLTFWLSNTIVLREIILQAFGNSCQVSPIMRLAGSNGSAKRNDGKSASLKWKGIPNGKSGNGFMQIGEDWQETGTFTFALERVESWIFSRLVESVWWQALTPHMQSSVVDSCSNKSFGRLLGPALGDHNQGNFSINLWRNAFQDAFQRLCPVRAGGHECGCLPVMARMVMEQCVDRLDVAMFNAILRESAHEIPTDPISDPIVDSKVLPIPAGNLSFGSGAQLKNSVGNWSRLLTDMFGIDAEDCLEECQENGENDERQGGDGERKSFALLNDLSDLLMLPKDMLIEKQVRQEVCPSISLSLIIRVLCNFTPDEFCPDPVPGTVLEALNGETFVERRLSAESIRSFPYAAAPVAYTPPSSANVAEKVAEAGGKSHLTRNVSVVQRRGYTSDEELEELESPITAIIDKVPSSPTVNTNGNGNHKEQGNHTTTNARYQLLREVWSL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04531 714 MobiDBLite consensus disorder prediction 159 181 - -
Vivi6g04531 714 MobiDBLite consensus disorder prediction 82 131 - -
Vivi6g04531 714 MobiDBLite consensus disorder prediction 1 27 - -
Vivi6g04531 714 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 85 712 IPR021827 GO:0005643
Vivi6g04531 714 MobiDBLite consensus disorder prediction 43 81 - -
Vivi6g04531 714 MobiDBLite consensus disorder prediction 28 42 - -
Vivi6g04531 714 Coils Coil 172 206 - -
Vivi6g04531 714 MobiDBLite consensus disorder prediction 149 181 - -
Vivi6g04531 714 MobiDBLite consensus disorder prediction 678 699 - -
Vivi6g04531 714 MobiDBLite consensus disorder prediction 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04531 Vivi-Chr6 147074889 147078346 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04531 - - vvo:131610387 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04531 6 147074889 147078346 Vivi6g04531 6 147074889 147078346 ECH