Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04509 ATGGCTATTGCAGCTGCTGCTGTTGTGGTTCCATTAGGCCTGCTCTTCTTCACCTCAGGCCTCATCGTTAATCTCATTCAGGCAACATTCTATGTTCTTGTAAGGCCGCTGTCAAAGAATTTGTACAGACGGATCAACCGGGTGGTGGCAGAACTGTTGTGGCTGGAACTTATTTGGCTTATTGATTGGTGGGCTGGAGTTAAGGTCCAAATATACACGGATAGCGAAACTTTTCGTTTGATGGGTAAAGAACATGCACTTGTCATATGCAATCACAGAAGTGATATTGATTGGCTTGTTGGATGGGTTTTAGCTCAGCGTTCAGGTTGCCTTGGAAGTACTGTAGCAGTGATGAAGAAATCATCAAAGTTACTACCGGTAATTGGCTGGTCAATGTGGTTTTCTGAGTATCTTTTCCTGGAGAGAAGTTGGGCCAAGGATGAAAACACATTGAAATCAGGTATACAGCGGTTGAGAGATTTTCCTCTTCCTTTTTGGTTGGCTCTCTTTGTAGAAGGAACACGCTTCACAAAGGTTAAATTGTTAGCTGCTCAGGAATATGCTGCATCCACTGGATTACCTGTTCCTAGAAACGTGTTGATTCCTAGAACTAAGGGGTTTGTTTCGGCTGTAAGTCATATGCGCTCATTTGTTCCTGCCATTTATGACATAACAGTGGCTGTCCCTAAAAGTTCTCCTGCTCCAACAATGCTAAGACTCTTAAATGGGAAACCTTCTGTGGTACAAGTTCATATCAAACGACATTTGATGAAAGAATTACCAGAAACAGACGAAGCTGTTGCTCAGTGGTGTAAAGATATATTTGTGGCCAAGGATGCATTGTTAGACAAACACTTAGCCGATGATACTTTCAGTGATCTAGAGCTGCAGGATACTCGCCGACCAATAAAGCCTCTTGCGGTAGCTCTATCTTGGGCTTTTGTGGTTGTCGCAGGCACTGCGAAGTTCCTACAATGGTCTTCGTTGCTATCATCGCGGAAGGGTGTTGCATTTTCAACCTTGGGTTTGGCAGTTGTTACTGGCCTCATGCACATCTTGATTTTATTCACACAGGCAGAGCGTTCTAACCCGGCCAAGGTAGCCCCTGCAAAGCCAAAGAACAAGGAAGAAAAACCCGAGGCTACAAATGACAAACAACAGTAG 1164 0.4416 MAIAAAAVVVPLGLLFFTSGLIVNLIQATFYVLVRPLSKNLYRRINRVVAELLWLELIWLIDWWAGVKVQIYTDSETFRLMGKEHALVICNHRSDIDWLVGWVLAQRSGCLGSTVAVMKKSSKLLPVIGWSMWFSEYLFLERSWAKDENTLKSGIQRLRDFPLPFWLALFVEGTRFTKVKLLAAQEYAASTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDITVAVPKSSPAPTMLRLLNGKPSVVQVHIKRHLMKELPETDEAVAQWCKDIFVAKDALLDKHLADDTFSDLELQDTRRPIKPLAVALSWAFVVVAGTAKFLQWSSLLSSRKGVAFSTLGLAVVTGLMHILILFTQAERSNPAKVAPAKPKNKEEKPEATNDKQQ 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04509 387 CDD LPLAT_LCLAT1-like 62 253 - -
Vivi6g04509 387 MobiDBLite consensus disorder prediction 370 387 - -
Vivi6g04509 387 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Vivi6g04509 387 Pfam Acyltransferase 78 228 IPR002123 GO:0016746
Vivi6g04509 387 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 44 238 - -
Vivi6g04509 387 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 9 341 - -
Vivi6g04509 387 MobiDBLite consensus disorder prediction 363 387 - -
Vivi6g04509 387 SMART plsc_2 86 208 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04509 Vivi-Chr6 146666539 146673469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04509 3 386 Miscellaneous Gene Families AT3G57650 72.396 0.0 588
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04509 K13523 - gmx:100792858 614.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04509 6 146666539 146673469 Vivi6g04509 6 146666539 146673469 ECH