Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04498 ATGAAGAAGAATGCATCATCTCCTTCTTCAGAGGATTGCATGCCTGTTACCACTCCTCTTCTTGATTTGGATAAGGAATCTGAGATATCAAGTGGTGAAGGGTCTCAAAATAGGGTCATAGAATTAGAAGATGAAGGAAAAGATGAATATAGCATTAATGATAGTCCTATTGAACAAGTGAGGCTTACAGTTCCAATCACCGATGACCCTTCTCAGCCAGCACTCACTTTCCGGACATGGATTCTAGGATTAGCATCATGTGTGCTCCTTGCATTTGTCAATCAATTTTTAGGCTACAGAACCAATCCTTTGAGCATCTCTTCTGTGTCAGCTCAGATCATTACACTCCCTCTTGGGAAACTTATGGCTGCAACACTTCCCACACAACCAATTCAAGTCCCTTTCACAACCTGGTCTTTTTCGTTGAATCCGGGGCCATTCTCTTTAAAGGAACATGTGTTGATAACTATCTTTGCTAGCTCAGGGTCTAGTGGTGTTTATGCAATTAACATAATCACAATTGTGAAGGCTTTCTATCACAGAAGTATTAATCCAGTAGCAGCGTATATGTTAGCACTATCGACTCAGATGCTAGGGTATGGATGGGCTGGAATTTTCAGAAGGTTCCTTGTTGATTCACCTTACATGTGGTGGCCTGCAAACCTTGTGCAAGTGTCTCTATTTAGAGCATTTCATGAAAAAGAAAAAAGGCCTAAAGGAGGAACTTCTAGGCTGCAATTCTTTTTCGTAGTCTTTGTAGCTAGCTTCGCGTATTACATTGTTCCAGGATATTTCTTCCAAGCAATATCAACTGTCTCTTTTGTTTGCTTGATTTGGACAGATTCCATCACTGCGCAACAGATCGGATCAGGCATGAAAGGCCTTGGCCTTGGTTCATTTGGCCTGGACTGGAACACAGTTGCTGGCTTCTTAGGTAGTCCTTTGGCTGTTCCTGGCTTTGCCATCATCAACATAATGGTTGGATTCTCATTGTATATGTATGTTTTGGTTCCAATTGCCTATTGGAACAATTTATATGATGCTAAAAAGTTTCCCCTCATTAGCTCTCACACATTTGACTCTACCGGTGCAACTTACAACGTTACTCGGATCCTCAATACCAAAACTTTTGGCATTGATATAGACAGTTACAACAATTACAGCAAGATCTATCTTAGTGTCATATTTGCTTTCGAGTACGGATTGAGCTTTGCAGCTCTTACAGCCACAATTTCACATGTTGTCCTCTTCCACGGAAAAATGATTCTCCAGATGTGGAAGAAGACAGCAAGTTCACTAAAAAACCATCTCGGAGATGTCCATACAAGAATTATGAAGAAAAACTATGAACAAGTTCCTGAATGGTGGTTTGTTTCCATTCTAATTCTAATGGTTATGATGGCTTTAGTAGCTTGCGAAGGTTTTGGCAAGCAACTTCAACTTCCATGGTGGGGAATTTTTCTTTCTCTAGCAATTGCATTAGTTTTCACTTTACCAATTGGTGTCATTCAAGCAACAACAAACATTAGTACGGGTCTCAATGTGATCACGGAGTTGGTTATCGGTTTCATTTATCCAGGAAAGCCACTAGCTAATGTAGCTTTCAAAACCTATGGTCATATCAGCATGGTACAAGCACTTGCTTTTCTTGGTGACTTCAAATTAGGCCACTATATGAAAATTCCACCAAAATCAATGTTCATTGTGCAGCTTGTTGGCACAGTAGTTGCATCATCTGTTCACTTTGGAACAGCATGGTGGCTTCTAACATCTATCGAGAACATATGCGATGAATCATTGTTGCCAAAAGGTAGTCCTTGGACATGTCCCGGTGATGATGTGTTCTACAATGCTTCCATCATATGGGGAGTTGTAGGGCCAAAGAGAATGTTTACCAAAGACGGCGTATATCCTGAGATGAATTGGTTTTTCCTTATTGGTCTACTTGCACCTGTCCCAGTGTGGCTTCTATCTATCAAATTTCCGAACCACAAATGGATTCAACTCATTAACATTCCTATCATCATTGCAGGTGCATCCGGCATCCCTCCAGTGAGATCTGTGAATTATATTAGTTGGGGAATTGTTGGAATATTTTTCAATTTTTATGTTTATAGAAAGTTCAAAGCATGGTGGGCTAGATATACTTATATTCTGTCAGCAGGTTTAGATGCTGGAGTTGCTTTTATGGGTTTATTACTTTACTTTGCTCTTCAGTCTTATGGTATATTTGGTCCATCATGGTGGGGTCTTGAAGCAGATCACTGCCCTTTGGCTAGATGCCCCACAGCTCCGGGTGTACAAGCAGAGGGTTGTCCTGTCCTTGACTTCCAAGTTACCATTTCATCTCCAATATTGCCAAGTTAA 2367 0.4068 MKKNASSPSSEDCMPVTTPLLDLDKESEISSGEGSQNRVIELEDEGKDEYSINDSPIEQVRLTVPITDDPSQPALTFRTWILGLASCVLLAFVNQFLGYRTNPLSISSVSAQIITLPLGKLMAATLPTQPIQVPFTTWSFSLNPGPFSLKEHVLITIFASSGSSGVYAINIITIVKAFYHRSINPVAAYMLALSTQMLGYGWAGIFRRFLVDSPYMWWPANLVQVSLFRAFHEKEKRPKGGTSRLQFFFVVFVASFAYYIVPGYFFQAISTVSFVCLIWTDSITAQQIGSGMKGLGLGSFGLDWNTVAGFLGSPLAVPGFAIINIMVGFSLYMYVLVPIAYWNNLYDAKKFPLISSHTFDSTGATYNVTRILNTKTFGIDIDSYNNYSKIYLSVIFAFEYGLSFAALTATISHVVLFHGKMILQMWKKTASSLKNHLGDVHTRIMKKNYEQVPEWWFVSILILMVMMALVACEGFGKQLQLPWWGIFLSLAIALVFTLPIGVIQATTNISTGLNVITELVIGFIYPGKPLANVAFKTYGHISMVQALAFLGDFKLGHYMKIPPKSMFIVQLVGTVVASSVHFGTAWWLLTSIENICDESLLPKGSPWTCPGDDVFYNASIIWGVVGPKRMFTKDGVYPEMNWFFLIGLLAPVPVWLLSIKFPNHKWIQLINIPIIIAGASGIPPVRSVNYISWGIVGIFFNFYVYRKFKAWWARYTYILSAGLDAGVAFMGLLLYFALQSYGIFGPSWWGLEADHCPLARCPTAPGVQAEGCPVLDFQVTISSPILPS 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04498 788 Pfam OPT oligopeptide transporter protein 75 737 IPR004813 GO:0035673
Vivi6g04498 788 PANTHER ISP4 LIKE PROTEIN 48 774 IPR004648 GO:0055085
Vivi6g04498 788 NCBIfam small oligopeptide transporter, OPT family 53 739 IPR004648 GO:0055085
Vivi6g04498 788 NCBIfam OPT family oligopeptide transporter 59 739 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04498 Vivi-Chr6 146558975 146561786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04498 53 775 Organic Solute Cotransporters AT4G26590 68.232 0.0 1057
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04498 - - gmx:100820498 1350.88