Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04454 ATGTCTTTCTTACCTTCTTTCACTTCTTTTATTTTCTCCTTAGTTGTATGTTTGATCATTTTTGAATATCACGTAGATGCTAATTCTAACGAGATCACATCAAAACTAGTGATTGATGCCGGTTCTGGAAGACTTATTCCAGATACATTTTTTGGAGCTTTTTTTGAAGAGATAAATCATGCTGGAGCTGGGGGATTATGGGCAGAACTTGTGAATAATAGAGGTTTTGAAGCAGAAGTTTCCACTAATGGGACCTCAAATATTTATCCATGGACAATTATTGGAGAAAATCAATCATCCATTATCGTATCAACCGAACATTCTTCTTGTTTTGAGCGTAATAAAATTGCATTACGTATGGATGTTCTTTGTCATAAAAAATCTTGTCCTCGAGGTGGTGTCGGTATTTCCAATCCAGGTTTTTGGGGAATGAATATTGAGGAAGGGAAGAAATATAAAGTAGTGTTCTATGTTAGATCACTTGGTCCAATTAATTTACAAGTTTCATTTGTTGGATCTGATAATGGTGTCAAAATAGCTTCAACCAAAATAAGAGCTTTTGGAGTTAATGTTACAAAGTGGAGTAAGATGGAAACAATTCTTGAAGCCAAAAGTACTAATCACAATTCAAATCTACAAATAACAACAACTAAAAAAGGAGTATTATGGTTAGATCAAATCTCAGCCATGCCATTAGATACATACAAGGGTCATGGTTTTCGAAGAGATCTTTTTGAAATGTTGGCGGATTTGAAGCCAAAATTTTTTAGATTTCCAGGTGGTTGTTATGTTGAAGGAGATTATTTGAGAAATGCTTTTAGGTGGAAAGATACAGTTGGAGCATGGGAAGAGAGACCTGGCCACTATGGTGATGTCTGGAAGTATTGGACAGATGATGGATTTGGTTATTTTGAGGGGCTTCAATTATCTGAGGATCTTGGTGCATTTCCAATTTGGGTGTTTAATAATGGTATTAGTCATCATGATGAAGTTAATACGTCTGCGATATCACCATTTGTGCAAGAAGCCTTAGATGGTATTGAGTTTGCGAGAGGTTCTCCAAAATCAAAATGGGGTTCTCTTAGAGCTTCCATGGGACATCCACACCCATTTGATTTGAGATATGTTGCAGTAGGAAATGAAGATTGTGGTAAATATAATTATGAAGGAAATTATCTCAAATTTTATGAAGCTATAAAACATAATTATCCTGACATTCAGATTATCTCAAATTGTGACGGTTCTCAACAACCACTCAATCATACAGCAGATCTTTATGATTTTCATATTTATTCAAATTCAAAGGAGATGTTTTCCCAATATACAAGGTTTGATAATGCATTACGATCCGGACCAAAGGCATTTGTTAGTGAGTATGCTGTTTGGAAGGAAGATGCGGGAAATGGAAGCCTTTACGCAGCTGTGGCTGAGGCTGCATTTCTTATTGGACTTGAAAAAAATAGTGATGTCGTCAGCATGGTTGCCTATGCACCCCTCTTTGTAAACACAAATGACAGAGCTTGGATGCCAGATGCAGTTGTATTTAACTCTTATGAAAGTTATAGAACTCCAAGTTATTGGCTCCAACAATTTTTTATTGACTCTAGTGGAGCAACCTTTCTTAATTCAATTCTTCAAAATTCTTCTAGCTCAATTGTTGCATCAGCAATTCAGTATAAAAATTCTCAAGATGGAAACAATTATCTAAAAGTCAAGGCAGTGAATTTTGGAAATGCAACGGAAAATTTTAATATTTTAATAAATGGTTTAAAATCAAAAGTTCAACAATTTGGTTCGTCAATGGTGGTGCTTACATCCTCCAATAAAATGGATGAGAATTCTTTCTCAGAACCAACAAAGATTGTGCCTAAAAGAACTCCACTTTTTAATGCAAGCAATGACATGATTGTTGCTCTTCCTCCTTATTCAGTTACATCACTAGATTTATTAATTTAA 1956 0.3502 MSFLPSFTSFIFSLVVCLIIFEYHVDANSNEITSKLVIDAGSGRLIPDTFFGAFFEEINHAGAGGLWAELVNNRGFEAEVSTNGTSNIYPWTIIGENQSSIIVSTEHSSCFERNKIALRMDVLCHKKSCPRGGVGISNPGFWGMNIEEGKKYKVVFYVRSLGPINLQVSFVGSDNGVKIASTKIRAFGVNVTKWSKMETILEAKSTNHNSNLQITTTKKGVLWLDQISAMPLDTYKGHGFRRDLFEMLADLKPKFFRFPGGCYVEGDYLRNAFRWKDTVGAWEERPGHYGDVWKYWTDDGFGYFEGLQLSEDLGAFPIWVFNNGISHHDEVNTSAISPFVQEALDGIEFARGSPKSKWGSLRASMGHPHPFDLRYVAVGNEDCGKYNYEGNYLKFYEAIKHNYPDIQIISNCDGSQQPLNHTADLYDFHIYSNSKEMFSQYTRFDNALRSGPKAFVSEYAVWKEDAGNGSLYAAVAEAAFLIGLEKNSDVVSMVAYAPLFVNTNDRAWMPDAVVFNSYESYRTPSYWLQQFFIDSSGATFLNSILQNSSSSIVASAIQYKNSQDGNNYLKVKAVNFGNATENFNILINGLKSKVQQFGSSMVVLTSSNKMDENSFSEPTKIVPKRTPLFNASNDMIVALPPYSVTSLDLLI 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04454 651 Gene3D - 539 649 IPR013780 -
Vivi6g04454 651 Gene3D - 67 224 - -
Vivi6g04454 651 SUPERFAMILY (Trans)glycosidases 210 540 IPR017853 -
Vivi6g04454 651 FunFam Alpha-L-arabinofuranosidase 1 533 650 - -
Vivi6g04454 651 FunFam Alpha-L-arabinofuranosidase 1 227 533 - -
Vivi6g04454 651 Pfam Alpha-L-arabinofuranosidase C-terminal domain 458 643 IPR010720 GO:0046373|GO:0046556
Vivi6g04454 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 10 650 - -
Vivi6g04454 651 Gene3D Glycosidases 225 534 - -
Vivi6g04454 651 SMART alpha_l_af_c 457 643 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04454 Vivi-Chr6 145990464 145994187 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04454 3 650 Glycoside Hydrolase AT3G10740 62.940 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04454 K01209 - gmx:100812703 942.954