LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi6g04397	ATGGCGGTGGGAAAGGATAACACGGAGATTGTGAAGGCACGAATCGACAAGAGGGATTACAGAAGGATCGTTCTCGGCAACTCTCTTCAGGCTCTCCTCATCAGCGATCCCGATACCGATAAGTGTGCTGCTTCTATGAGCGTTGGCGTCGGTTACTTCTCTGATCCTGCTGGTCTTGAAGGCCTCGCACATTTCCTAGAGCATATGCTGTTTTATGCTAGTGAAAAGTACCCTGTGGAAGATAGCTACTCCAAGTATATTAGCGAGCATGGAGGAAGTACCAATGCTTTTACATCTTCTGAGAACACCAATTATTTTTTTGATGTAAACACTGATGGTTTTGAAGAGGCTCTTGACAGATTTTCTCAATTCTTTACTAAACCATTGATGTCTGCTGATGCCACCATGAGGGAAATTAAAGCTGTTGACTCTGAAAACCAGAAAAATTTATTATCTGATGGGTGGAGAATGAACCAGCTTCAGAAACATCTCACTGCTGAAGATCACCCATATCATAAATTTAGCACAGGGAATTGGGACACTTTGGAAGTTAGACCAAAAGCAAAGGGAATAGACACAAGGAATGAGCTTATCAAATTCCATGAAGAAAAATACTCTGCTAATCTAATGCACCTCGTTGTATATACAAATGAAAGCCTTGATAAAGCTCAAAACCTTGTTGAAGAAAAGTTCCAAGATATTAGAAACACCAATCTAGATTATTTTCGCACCTCTGATCAGCCATGCAAATCAGATCATTTACAGATTGTTGTCAGGACTGTCCCAATAAAACAAGGTCATAAATTAAGAATTGTATGGCCAGTGACCCCTGAAATTCTGCATTACATGGAAGGGCCAAGCAGGTATCTTGCTCATCTTATTGGCCATGAAGGAGAAGGGTCTTTATATTACATTCTGAAAAAATTAGGATGGGCTACAAGCTTGTCTGCGGGTGAATCAGATTTGAGTTTAGACTTTTCCTTTTTTAAAGTTGTGATTGATCTTACTGATGCTGGCCATGAACACATGCAAGATATCGTTGGCTTGTTGTTCAAGTACATTGAACTTCTACAACAGTCTGGTGTTTGCAAATGGATATTTGAAGAGCTTTCAGCGGTTTGTGAGACTAAGTTTCACTATCAGGATAAAATTCCTCCTAGTGATTATGTCGTTAATATTGCATCAAATATGCAGTACTATCCTCCAAAAGATTGGTTGGTTGGATCATCACTTCCTTCTAAGTTTAGCCCTAGTGTTATCCAAATGGTTCTAGATCAGCTTTCTCCAAACAATGTCCGAATCTTTTGGGAATCAAAAAGTTTTGAAGGACATACTGATAAGGTAGAACCATGGTATGGAACTGCATATTCCATTGAAAAAATTACTGCGTCAACAATTCAGGGGTGGGTGCTTTCTGCTCCTAATGAAAATGTGCATCTTCCAGCTCCTAACAAATTCATTCCAACAGACTTGTCTCTTAAAATTGCGCCAGAGAAAGTGAAATTTCCAGTTTTGTTAAGCAGGTCATCTTATTCAGCATTATGGTACAAGCCAGACACATTATTTTCCACACCAAAGGCTTATGTTAAGATTAATTTCAATTGCCCATATGCTGGAAACTCTCCCGAGGCTGAAATTTTGACGCACATTTTCACTCAGTTATTGATGGATTACTTGAATGATAATGCTTATTATGCTCAGGTTGCTGGTTTGTATTATAGTATAAGCCATACAGATGGCGGTTTCCAGGTGAATCTCCTTGGTTATAATCACAAATTAAGGATTCTACTTGAAACTATTGTTGAAGAGATTGCAACATTCAGAGTGAAAACCGAGAGGTTCTCAGTTATCAAGGAAACAGTGACAAAGGAATACCAGAATTTCAAGTACCAACAACCCTATCAGCAGGCTATGTACTATTGTTCTTTGATACTACAGGATCAAACCTGGCCTTGGGTAGAACAGCTAGAAGTACTTCCTGCTCTTCAAGCTGAAGATCTTGCTAAATTTGTGCCAGCAATGCTCTCAAGGACCTTTTTAGAGTGCTATATAGCAGGAAACATTGAAAGCCAGGAAGCAGAGGCAATGATTGCGCACATAGAAGATGTTCTTTTCAAGTGTTCAAAACCTTTATGCCAACCTTTATTCCCATCTCAGCATTTGACAAATAGGGTTGTTAAGCTTGAAAGTGGCATAAATTACTTTTACCCTTCAGAATGTCTTAATCCCAATGAAGAGAATTCTGCTCTAGTGCACTATATACAGGTTGGTCGAGATGACTTCAAGCTGAATGCCAAACTTCAGCTTTTTGCTCTTGTCGCAAAGCAACCGACCTTTCACCAGCTTCGATCAGTTGAGCAGCTGGGGTACATTACTGTGCTCATGCAGAGGAATGATTGTGGTGTACGTGGACTACAGTTTATCATTCAGTCCACAGTAAAGGCTCCTGGAAGCATCCAAGAGAGAGTTGAGGCATTTCTCAAGATGTTTGAGACCAAACTTAACGAGATGACAATTGAAGAATTTAAGAGTAATGTAAATGCTTTGATTGATATGAAATTAGAGAAGCACAAGAATTTAAGGGAAGAATCAACATTTTTCTGGCGAGAGGTTAATGATGGTACTTTGAGATTTGATAGGAGAGACTTTGAGATTGAAGAATTAAGGAAGCTGACTCTTCAAGAATTGATAGATTTCTTTAATGAATATGTCAAAGTTGGTGCTCCTCGAAAGAGGACTTTAAGTGTGCGGGTTCATGGAAAGCTTCATTCTTCTGAGTACAAATCAGAAGCTTCAGAACCACACTTGGCTAGAATAGATAATATTTTTGGTTTTAGAAAATCACAGTCTCTTTATGGTTCATTTAAAGGTCTTACTGGGCAGATGAAATTGTAG	2895	0.391	MAVGKDNTEIVKARIDKRDYRRIVLGNSLQALLISDPDTDKCAASMSVGVGYFSDPAGLEGLAHFLEHMLFYASEKYPVEDSYSKYISEHGGSTNAFTSSENTNYFFDVNTDGFEEALDRFSQFFTKPLMSADATMREIKAVDSENQKNLLSDGWRMNQLQKHLTAEDHPYHKFSTGNWDTLEVRPKAKGIDTRNELIKFHEEKYSANLMHLVVYTNESLDKAQNLVEEKFQDIRNTNLDYFRTSDQPCKSDHLQIVVRTVPIKQGHKLRIVWPVTPEILHYMEGPSRYLAHLIGHEGEGSLYYILKKLGWATSLSAGESDLSLDFSFFKVVIDLTDAGHEHMQDIVGLLFKYIELLQQSGVCKWIFEELSAVCETKFHYQDKIPPSDYVVNIASNMQYYPPKDWLVGSSLPSKFSPSVIQMVLDQLSPNNVRIFWESKSFEGHTDKVEPWYGTAYSIEKITASTIQGWVLSAPNENVHLPAPNKFIPTDLSLKIAPEKVKFPVLLSRSSYSALWYKPDTLFSTPKAYVKINFNCPYAGNSPEAEILTHIFTQLLMDYLNDNAYYAQVAGLYYSISHTDGGFQVNLLGYNHKLRILLETIVEEIATFRVKTERFSVIKETVTKEYQNFKYQQPYQQAMYYCSLILQDQTWPWVEQLEVLPALQAEDLAKFVPAMLSRTFLECYIAGNIESQEAEAMIAHIEDVLFKCSKPLCQPLFPSQHLTNRVVKLESGINYFYPSECLNPNEENSALVHYIQVGRDDFKLNAKLQLFALVAKQPTFHQLRSVEQLGYITVLMQRNDCGVRGLQFIIQSTVKAPGSIQERVEAFLKMFETKLNEMTIEEFKSNVNALIDMKLEKHKNLREESTFFWREVNDGTLRFDRRDFEIEELRKLTLQELIDFFNEYVKVGAPRKRTLSVRVHGKLHSSEYKSEASEPHLARIDNIFGFRKSQSLYGSFKGLTGQMKL	964

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi6g04397	964	ProSitePatterns	Insulinase family, zinc-binding region signature.	51	74	IPR001431	GO:0004222\|GO:0006508
	Vivi6g04397	964	PANTHER	NARDILYSIN	5	941	-	-
	Vivi6g04397	964	SUPERFAMILY	LuxS/MPP-like metallohydrolase	245	483	IPR011249	GO:0046872
	Vivi6g04397	964	SUPERFAMILY	LuxS/MPP-like metallohydrolase	729	952	IPR011249	GO:0046872
	Vivi6g04397	964	Gene3D	-	2	240	-	-
	Vivi6g04397	964	FunFam	Insulin-degrading enzyme	499	725	-	-
	Vivi6g04397	964	SUPERFAMILY	LuxS/MPP-like metallohydrolase	484	706	IPR011249	GO:0046872
	Vivi6g04397	964	Gene3D	-	499	725	-	-
	Vivi6g04397	964	Gene3D	-	726	960	-	-
	Vivi6g04397	964	FunFam	Putative insulin-degrading enzyme	1	241	-	-
	Vivi6g04397	964	Pfam	Middle or third domain of peptidase_M16	378	657	IPR032632	-
	Vivi6g04397	964	FunFam	Insulin-degrading enzyme-like 1 peroxisomal	726	958	-	-
	Vivi6g04397	964	Pfam	Insulinase (Peptidase family M16)	32	165	IPR011765	-
	Vivi6g04397	964	Gene3D	-	243	470	-	-
	Vivi6g04397	964	FunFam	nardilysin isoform X1	243	470	-	-
	Vivi6g04397	964	SUPERFAMILY	LuxS/MPP-like metallohydrolase	6	239	IPR011249	GO:0046872
	Vivi6g04397	964	Pfam	Peptidase M16 inactive domain	193	369	IPR007863	-
	Vivi6g04397	964	Pfam	Peptidase M16 inactive domain	662	849	IPR007863	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi6g04397	Vivi-Chr6	144459362	144474808	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi6g04397	K01408		-	gmx:100804856	1745.33

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi6g04397	6	144459362	144474808	Vivi6g04397	6	144459362	144474808	ECH