LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi6g04394	ATGGCATGCAACGGCGGCGGCGGCTGTCAATCTGGTTGCTACAAAGATGAAGAAACGACATGCGACCAACCTACTGCGTCTTCAGAGACTGATTCTAGAAGCTCCAGCAATCTCTGCCTCAAGTGCAAGCTAAACGACGTCGTTTCGGGTTACGGCGGAATCGACGATGGTCGTTTCTGCGCCGATTGCTTCCGCAGCAACTTGTTCGGGAAGTTTCGACTTGCTGTCACATCAAACGCTATGATCTCTCCCACCGATAAGGTCCTTGTTGCCTTCTCCGGTGGTCCTTCTTCCAGGGTAGCTTTGCAATTTGTGCATGATATGCAAGAGAGGGCTCATAAGAACTTTGAAGCTAGTAGAGATAGGTCATTACCTGTGTTTGGTGTTGGAGTTGTGTTTATTGATGAGAGTGTTGTTTTTCCGATTCCTTCTCATGAAATGGAAGAGGCAGTTGAAGCTATTAGTTTGATTGTGTCGAGTTTAGCCCCGCCAAGTAAGGAGTTTCATTTTGTTCCGATTGAGACTGTTTACTCGTCGGATTCTGATGATGGAAAGGAGAGGTTAATTGAGCTGATGAATGTAGTGAGTGATCCCACTGGTAGGGAGGATTTGTTACTTTCTCTGCGAATGTTGGCCTTGCAAAAGGTGGCTTCTGAATTTGGGTATAACAGGATTGTTCTAGGCTCGTGCGTTTCAAGGATTGCTGCTCATGTCATTTCAGCCACTGTGAAGGGGCAAGGATATTCATTACCTGCTGATATCCAGTATGTTGATGCTAGATGGGAAATTCCAGTTGTGCTTCCTCTGCGTGATTGTTTTGTTCAAGAGATCAACATGTTTTGCCGTCTCGACAGTCTAAAGACTATTAAACTGTCTACCAGTCCAAGTTCTACCATTAATAGCTTGGTGTCATCTTTTGTGGCTTTATTGCAGGAAGAGAACCCATCTCGAGAGAGCACAATTGTAAGAACAGCTGGGAAACTTATCCCCTTTCAATTCAATAGGATTCCAGAGATTGTTGATGGTAATGTTCCATTGGCAACTCGAAGACGGCAAAAGAGATACAATCTCAAATCCAATGAATCTGTTTCCTCAGAATCTTTTTGTCCTCTCTGCAATAGCCCACTTGACAAAAGTGAGATTGTTGATTGGAGCAATCACAAAAATTGCAGAAGTAGTGACACTTTTTATACTTCTTGCTGTTCAAGTTGTCAATTTCAGATACTTCCACCTGATTCCACATCAATGGAGAAATTTTATATGGATTTACCGCATAAAGTGGTTGCCCGGTCAAATCAGGTCAACAATGGTAAATTGAATGCACTGAGGGAACAGATACAAGATTGCTTGCTTTCCGATGGTGAAGATGAAACTTAA	1377	0.4336	MACNGGGGCQSGCYKDEETTCDQPTASSETDSRSSSNLCLKCKLNDVVSGYGGIDDGRFCADCFRSNLFGKFRLAVTSNAMISPTDKVLVAFSGGPSSRVALQFVHDMQERAHKNFEASRDRSLPVFGVGVVFIDESVVFPIPSHEMEEAVEAISLIVSSLAPPSKEFHFVPIETVYSSDSDDGKERLIELMNVVSDPTGREDLLLSLRMLALQKVASEFGYNRIVLGSCVSRIAAHVISATVKGQGYSLPADIQYVDARWEIPVVLPLRDCFVQEINMFCRLDSLKTIKLSTSPSSTINSLVSSFVALLQEENPSRESTIVRTAGKLIPFQFNRIPEIVDGNVPLATRRRQKRYNLKSNESVSSESFCPLCNSPLDKSEIVDWSNHKNCRSSDTFYTSCCSSCQFQILPPDSTSMEKFYMDLPHKVVARSNQVNNGKLNALREQIQDCLLSDGEDET	458

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi6g04394	458	Pfam	Cytoplasmic tRNA 2-thiolation protein 2	298	392	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Vivi6g04394	458	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	62	290	-	-
	Vivi6g04394	458	PANTHER	CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2	34	447	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Vivi6g04394	458	Gene3D	HUPs	38	405	IPR014729	-
	Vivi6g04394	458	Hamap	Cytoplasmic tRNA 2-thiolation protein 2 [CTU2].	33	412	IPR019407	GO:0000049\|GO:0002098\|GO:0034227
	Vivi6g04394	458	FunFam	Cytoplasmic tRNA 2-thiolation protein 2	38	404	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi6g04394	K14169		-	gmx:100804325	758.829

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vivi6g04394	6	144436831	144440372	Vivi6g04394	6	144436831	144440372	ECH