Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04374 ATGGATAATATATTCAAATATAGTGATAAGACACTGGTGTTTGCATACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTGTCTTTTTTGATATCCACCTTTTTCAAAAGGGCCAAAACAGCTGTAGCTGTTGGAACTCTGTCATTTCTTGGTGCCTTTTTCCCTTATTACACTGTCAACGATGAGGGAGTCTCTATGATCTTGAAGGTTCTTGCTTCTCTACTTTCACCTACGGCATTTGCTCTGGGTTCTGTCAACTTTGCTGATTATGAGCGTGCTCATGTTGGGCTTCGTTGGAGCAACATATGGCGAGAGTCCTCTGGAGTGAACTTTTTAGCTTGTCTTCTAATGATGATACTTGATACACTGCTCTATTGTGCAATTGGACTGTATTTTGATAAGGTTCTTCCAAGGGAGCATGGAATGCAATATCCATGGAACTTTATTTTCAAAAAAGACTTTGGGAGAAAGAAAAAAATTGAAGAAAATTGTTCCTCCAGTTTTAAAGTTAAAGTTACTGGTAATAGTTCTGAGCCAGAAAGGAATCTTTTTGGGCAAGATACTACCAATCCTGCTATAGAAGCAATAAGCTTAGACATGAAACAACAGGAGCTTGATGGAAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGATACTAAAAAAGGAGATTGCTGTGCTGTTAATTCATTGCAACTGACATTATATGAAAATCAGATTCTTGCTCTTCTAGGACATAATGGAGCTGGGAAAAGCACGACAATATCAATGCTTGTTGGTCTTCTTCCTCCTACTTCTGGGGATGCTTTGATTTTTGGAAAGAATATTGTCTCTGATATTGATGAGATACGGAAGGTTTTGGGTGTTTGTCCACAACATGATATACTCTTTCCTGAATTGACTGTGAGAGAGCATTTAGAACTATTTGCTATATTAAAGGGTGTGGAGGAAGACACTCTGGAGAATGTTATTATTAATATGGCCGATGAGGTGGGCCTGGCAGATAAAATCAACACTGTTGTGAGTTCTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATCGCATTAGTTGGAAACAGTAAGGTTATAATTCTTGACGAGCCTACAAGTGGAATGGATCCATATTCGATGCGATTGACTTGGCAGTTAATAAAAAAAATTAAGAAGGGCAGAATAATTTTGCTTACAACACATTCCATGGACGAAGCAGATGAACTAGGTGACCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCCCTTTTCTTGAAGCATCATTATGGAGTTGGTTACACTTTAACTCTTGTAAAGTCTGCTCCTACTGCTTCTATAGCTGGTGATATTGTATACCGATATATTCCAACAGCAACCTGTATAAGTGAGGTTGGAACTGAGATTTCCTTCAGACTCCCTATGGCATCCTCCTCAACCTTTGAGAGGATGTTCAGGGAAATTGAAGGTTGCATGAAAAAACCACTTTTAAGCATGGAAATAAGTGACAGTTGTGAAAAAGACAGTCATGGTATTGAAAGTTATGGTATATCTGTAACAACCCTGGAGGAGGTATTCTTGAGAGTTGCTGGATGTGACTATGATGAAGTTGAATGCTCTGAAGAAACTAACCGCTCCCTTATATCAGAACCTGTAGTTTCTCTTGCTTCTGATGATTGTCCATCCACAAAAATATGTTATTATAAAGTTTTTGGAAATTATAAGAAGGTTATTGGCTTCATGTCTACGATGGTGGGGAGAGCTTGTGATTTAATATTTGCTGCAGTTATTAGTTTTATCAACTTCATTGGCATGCAGTGTTGTAGCTGCTGTCTCATTACTAGGTCCACTTTTTGGCAGCATTCTAAAGCTTTATTTATTAAGAGGGCAATATCTGCTCGCAGAGATCACAAAACAATTATGTTTCAACTAATAATTCCTGCTATCTTCTTGTTTATTGGTCTTTTATTTATGGAGCTCAAGCCACATCCTGATCAGATTTCACTGACTCTTTCAACATCTAATTTTAATCCTCTATTGAGCGGTGGGGGTGGGGGTGGTCCAATTCCGTTTAACCTATCTTTTCCAATTGCAGAAAAGGTAGCACAAAATGTCAAAGGAGGTTGGATTCAAAGTTGCAACCCAAGCTCATACAAATTCCCCAATTCAGAAAAGGCATTAACTGATGCAATGGAAGCAGCAGGGCCAACTTTGGGACCTGCTCTACTTTCAATGAGTGAATATTTAATGTCTAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAAAACACTGATGGAAGCTTAGGCTACACCGTATTACACAACTTTTCTTGTCAGCATGCTGCTCCCACCTTTATCAATTTGATGAATTCTGCAATTCTTAGGCTTGCTACTCATGACATGAATGCCACAATTCAGACACGCAACTACCCTCTACCAATGACACAAAGCCAGCACTTACAACGTCATGACCTGGATGCTTTCTCTGCTGCCATCATTGTCAACATAGCCTTCTCTTTCATTCCTGCTTCATTTGCTGTTTCAATTGTTAAGGAACGAGAAGTGAAAGCTAAGCATCAACAACTAATCAGTGGGGTTTCAGTCCTTTCATATTGGGTGTCTATATTTATTTGGGACTTCGTGAGCTTCTTGTTTCCGGCCTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTCTGGATCAGTTTGTTGGGGGAGTTTCTTTGGTACCAACTATCATCATGCTTTTGGAATATGGACTTTCAATTGCTTCGTCAACTTATTGCCTTACATTTTTCTTTTTTGACCACACTGTGGCCCAGAACGTGGTTCTCCTGGTCCACTTTTTTTCGGGATTGATACTAATGGTTATCTCATTCGTTATGGGACTCTTCCCATCCACAATAAGCGCCAATTCTTTTCTTAAGAACTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGACTTGCTTCATTAGCTCTTCTGCGGCAAGGAATGAAAGATAAAACAAGCGATGGAGTGTATGACTGGAATGTTACGGGTGCCTCCATTTGTTATCTTGCTGTTGAGAGCGTTGTCTATTTTTTATTGACACTCGGGCTTGAAATTTTTCCTTCTCTCAAATTGACTCCGTTCATGATCAAAAAGTGGTGGGGGAAAATTAATATATTCCCACATAATTCTACTTATCTGGAACCTTTATTAGAACCTGCTGAAACTTTTGTTACGGACCTCAACGAAGACGTGGATGTGAAAACAGAAAGAAATAGAGTACTCTCAGGCTCCATTGATAATGCCATTATCTACTTGCGCAATCTTCGCAAGGTGTATTCTGAGGAGAAGAAACATGGGAAAAAGGTTGCAGTAGATTCATTAACCTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAAACCACAACACTTTCTATGTTATGCGGGGAAGAATCTCCTTCTGACGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCCATCCCAAGGCTGCTCGTAAACATATTGGGTATTGTCCACAATTTGATGCTCTGTTGGAATTCTTAACTGTAAAAGAGCATCTTGAGCTCTATGCTAGAATAAAAAGTGTTCCAGACTACACAATAGACAATGTTGTTATGGAAAAGTTGGTAGAGTTTGACTTACTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGAAAACTATCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAACCATCCACAGGAATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGAATCTCAACTAGACGAGGAAAGACTGCAGTTATTCTTACTACCCATAGCATGAATGAAGCTCAAGCCTTGTGTACCAGAATAGGGATTATGGTTGGTGGACAACTAAGATGTATTGGAAGTCCGCAGCATCTAAAGACAAGATTTGGCAATCATTTAGAACTAGAGGTAAAACCCACTGAAGTGAGTTCTGTTGACTTGCAAACACTCTGCCAAGCTATTCAGGAAGTACTTTTTGATGTCCCTTCTCAACCTAGAAGCTTACTCAATGACCTTGAAATTTGCATTGGGGGTGCTGATTCCATCACCTCAGGAAATACCTCCATTGCAGAGATTAGCTTGACACCAGATATGATAGGCTTAATTGGAAGATGGCTTGGCAACGAAGAAAGAGTGAAGACTCTAATGTGCTGTACACCTGTCTATGACGGGGCCTCTCAGGAGCAGTTATCCGAACAATTATTTCGAGATGGTGGTATTCCATTGCCAGTGTTTTCTGAGTGGTGGCTGTCCAAACAAAAATTCTCAGAAATTGATTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGCCAAGGATACAATGGTTTAAGCATCAGATACCAGTTACCTTATGACGAGGACTTTTCCCTAGCAGATGTTTTTGGACTTCTTGAAGCAAATAGAGATAGGTTAGGGATTGCAGAGTACAGCCTCAGCCAATCAACTCTGGAGACAATATTTAATCATTTTGCAGCTAATGCGTGA 4626 0.3952 MDNIFKYSDKTLVFAYFFIFGLSAIMLSFLISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMILKVLASLLSPTAFALGSVNFADYERAHVGLRWSNIWRESSGVNFLACLLMMILDTLLYCAIGLYFDKVLPREHGMQYPWNFIFKKDFGRKKKIEENCSSSFKVKVTGNSSEPERNLFGQDTTNPAIEAISLDMKQQELDGRCIQIRNLHKVYDTKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALIFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFAILKGVEEDTLENVIINMADEVGLADKINTVVSSLSGGMKRKLSLGIALVGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRYIPTATCISEVGTEISFRLPMASSSTFERMFREIEGCMKKPLLSMEISDSCEKDSHGIESYGISVTTLEEVFLRVAGCDYDEVECSEETNRSLISEPVVSLASDDCPSTKICYYKVFGNYKKVIGFMSTMVGRACDLIFAAVISFINFIGMQCCSCCLITRSTFWQHSKALFIKRAISARRDHKTIMFQLIIPAIFLFIGLLFMELKPHPDQISLTLSTSNFNPLLSGGGGGGPIPFNLSFPIAEKVAQNVKGGWIQSCNPSSYKFPNSEKALTDAMEAAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNTDGSLGYTVLHNFSCQHAAPTFINLMNSAILRLATHDMNATIQTRNYPLPMTQSQHLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSVLSYWVSIFIWDFVSFLFPASFAIVLFYIFGLDQFVGGVSLVPTIIMLLEYGLSIASSTYCLTFFFFDHTVAQNVVLLVHFFSGLILMVISFVMGLFPSTISANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVYDWNVTGASICYLAVESVVYFLLTLGLEIFPSLKLTPFMIKKWWGKINIFPHNSTYLEPLLEPAETFVTDLNEDVDVKTERNRVLSGSIDNAIIYLRNLRKVYSEEKKHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARKHIGYCPQFDALLEFLTVKEHLELYARIKSVPDYTIDNVVMEKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLQTLCQAIQEVLFDVPSQPRSLLNDLEICIGGADSITSGNTSIAEISLTPDMIGLIGRWLGNEERVKTLMCCTPVYDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGYNGLSIRYQLPYDEDFSLADVFGLLEANRDRLGIAEYSLSQSTLETIFNHFAANA 1541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04374 1541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 448 IPR027417 -
Vivi6g04374 1541 Gene3D - 1105 1355 IPR027417 -
Vivi6g04374 1541 Gene3D - 197 446 IPR027417 -
Vivi6g04374 1541 ProSitePatterns ABC transporters family signature. 1250 1264 IPR017871 GO:0005524|GO:0016887
Vivi6g04374 1541 CDD ABC_subfamily_A 210 431 - -
Vivi6g04374 1541 CDD ABC_subfamily_A 1113 1339 - -
Vivi6g04374 1541 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 638 1049 IPR026082 GO:0016020|GO:0055085|GO:0140359
Vivi6g04374 1541 Pfam ABC-2 family transporter protein 642 1044 IPR013525 GO:0016020|GO:0140359
Vivi6g04374 1541 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1113 1351 IPR003439 GO:0005524
Vivi6g04374 1541 Pfam ABC transporter 230 373 IPR003439 GO:0005524
Vivi6g04374 1541 ProSitePatterns ABC transporters family signature. 345 359 IPR017871 GO:0005524|GO:0016887
Vivi6g04374 1541 FunFam ABC transporter A family member 1 1102 1356 - -
Vivi6g04374 1541 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 210 443 IPR003439 GO:0005524
Vivi6g04374 1541 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1112 1342 IPR027417 -
Vivi6g04374 1541 SMART AAA_5 238 420 IPR003593 GO:0016887
Vivi6g04374 1541 SMART AAA_5 1143 1329 IPR003593 GO:0016887
Vivi6g04374 1541 Pfam ABC transporter 1135 1277 IPR003439 GO:0005524
Vivi6g04374 1541 FunFam ATP-binding cassette sub-family A member 12 202 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04374 Vivi-Chr6 144101927 144128472 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04374 210 446 Calmodulin-binding Proteins AT2G36910 25.101 1.78e-16 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04374 K05643 - gmx:100803263 2707.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04374 6 144101927 144128472 Vivi6g04374 6 144101927 144128472 ECH