Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04369 ATGGCGGCGTTGAAAGGGTTATTGAAAAAAGGTTTAGGAGAAATGGATTTCAACACCGGCGGAGGACTCATAAACTGGTTCCCGGGACACATGGCAGCCGCCACACGCGCCATCCGCAACCGCCTTAAGCTCGCCGACCTCGTCATCGAAGTCAGAGACGCTCGTATTCCGTTATCCTCCATCAATGTCAATCTTCAACCTCACCTTTCCGCCAAACGACGTGTCATCGCACTCAACAAAAAAGACCTGGCCAATCCCAACATCATGCATAAATGGGTGAAATATTTTGAGACGAGTAAGCAAGATTGCATTCCGATTAATGCTCACAGTAAGAGTTCTGTTACGAAGCTTCTGGAACTTGTAGAGGTGAAATTGAAGGAAGCGATTTCGAAGGAACCTACTTTACTTGTTATGGTTGTTGGTGTTCCGAATGTTGGCAAGTCTTGTTTGATTAATTCCATTCATCAGATTGCGCATTCTCGATTCCCCGTGCAGGAGAAGATGAAGCGAGCTACTGTGGGTCCACTACCTGGTGTTACTCAAGATATTGCAGGATTTAAGATAGCAAACAAACCGAGCATATACGTCCTAGATACCCCAGGGGTTCTGGTTCCAAGTATCTCAGACATAGAGACAGGGTTAAAGCTTGCTCTTGCAGGGTCTGTTAAAGATTCAGTGGTGGGCGAGGAACGAATTGCTCAATACTTTTTGGCAGTTTTAAATACCCGGGGTACTCCATTTCATTGGAAGCACCTCAATAATAGGAGAGTTGATGGGATTGCAAATGAAGCCGAGGAAAATCATAGATATGACCTGAAAAATCTTAAGCAAAGGAGAGGTCAGCCTAACAGATCTGACTTGGTATATGTGGAGGATATTGTGTTGGGAGTTCACCGTGCACTCTATTCGACTCTAGCAGAATTCGAAGGCAACGTAGAAGATGAGGGTGACTTGGAGAACTTGATTGACCTGCAGTTTGGTGCACTACAGAAGGCATTGAAGATACCTCACAAGGCTTCAGAAGCACGTTTGATGGTATCCAAAAAGTTCCTTACTCTATTCAGGGCTGGTAAACTAGGACCTTTTATTCTTGATGATGTCCCTGGTGTTAAGCCTGTATAA 1122 0.4492 MAALKGLLKKGLGEMDFNTGGGLINWFPGHMAAATRAIRNRLKLADLVIEVRDARIPLSSINVNLQPHLSAKRRVIALNKKDLANPNIMHKWVKYFETSKQDCIPINAHSKSSVTKLLELVEVKLKEAISKEPTLLVMVVGVPNVGKSCLINSIHQIAHSRFPVQEKMKRATVGPLPGVTQDIAGFKIANKPSIYVLDTPGVLVPSISDIETGLKLALAGSVKDSVVGEERIAQYFLAVLNTRGTPFHWKHLNNRRVDGIANEAEENHRYDLKNLKQRRGQPNRSDLVYVEDIVLGVHRALYSTLAEFEGNVEDEGDLENLIDLQFGALQKALKIPHKASEARLMVSKKFLTLFRAGKLGPFILDDVPGVKPV 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04369 373 PANTHER MITOCHONDRIAL RIBOSOME-ASSOCIATED GTPASE 1 14 368 - -
Vivi6g04369 373 FunFam Mitochondrial GTPase 1 24 203 - -
Vivi6g04369 373 Gene3D - 24 203 IPR027417 -
Vivi6g04369 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 217 IPR027417 -
Vivi6g04369 373 Gene3D - 208 300 IPR023179 -
Vivi6g04369 373 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 35 205 IPR030378 GO:0005525
Vivi6g04369 373 Pfam 50S ribosome-binding GTPase 137 243 IPR006073 GO:0005525
Vivi6g04369 373 CDD YlqF 26 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04369 Vivi-Chr6 144016936 144019534 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04369 K19828 - gmx:100801130 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04369 6 144016936 144019534 Vivi6g04369 6 144016936 144019534 ECH