Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04359 ATGGATTCTGTGCTTGGTAATTTGCCATCTTATAACCCTCACAATTTCAGTCAGATTCGACCTTCAGATCCTTCTAGTTCTTCTAAGACACCAGCTACTTACCATCCTACTCACAGCAGGACCCTTCCACCGCCTGATCAAGTGATAAACACTGAAGCCAAAAATATCCTTCTAAGGCACATTTATCAGCATGCTCGGGAAAAGTTGAAACCAAAAAGAGCTGCAGCTGGCAACCTTTTACCGGAGCACGGATGCAAGCAACCTAGGGTTTCCACTTGA 279 0.448 MDSVLGNLPSYNPHNFSQIRPSDPSSSSKTPATYHPTHSRTLPPPDQVINTEAKNILLRHIYQHAREKLKPKRAAAGNLLPEHGCKQPRVST 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04359 92 MobiDBLite consensus disorder prediction 1 37 - -
Vivi6g04359 92 Pfam Det1 complexing ubiquitin ligase 4 66 IPR018276 -
Vivi6g04359 92 MobiDBLite consensus disorder prediction 68 92 - -
Vivi6g04359 92 MobiDBLite consensus disorder prediction 1 51 - -
Vivi6g04359 92 PANTHER DET1- AND DDB1-ASSOCIATED PROTEIN 1 1 90 IPR033575 GO:0032434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04359 Vivi-Chr6 143908090 143911199 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04359 K11792 - gmx:100784555 148.673