Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04335 ATGTCGCCGGCGCCGATCAACTCCTCCGCCGATACAACTCCACATACTCCTACTCCTATTCACTTCGCTCCTTTCAATGCCGACGCCATCAAACCTCCTGCCTCCACCGCACGTGCACGGTCGCGGCCGAGACTGGCGAAACTGAGGAAGCAATCAGCGTCTCAGACCACAAGGTCGAGGAGCAGAACCGCATCCGCAGTCACCGGTTTCAATCCTTTTCGCTCTGATCAGGTATGTAGTGGTTCCGATACTTGTGAGACTGGTATGAACGGTAGCGAGGGTTTTGTTTTTGGTGCTAGGAAGGTTGATTCTGATTCTGTTAGGGATTTGAAAAATTCGGAGGAGGAGAAAGAAACAGAGGTTAGGAAAAGTGGTAGTGTGGAATTTGTGTTTAATGCTGATGAAATTTATGCTAAATTGGATTCACTTTTTGACGGAGAGGAAAAGAGTAGTGAGAATGAGGGGAAGAAAGTTTCTGGTGAGGAAAGGGAGAAGTTAAATTCGGAACGGGAGAAGTTAAATTCGGAACGGGAGAAGGGGGAGGTTAATGTTACAGGGTTCGTTTTTAGTGCTGGTAGAAACGACAATCCTTCTAGTTTGAATACAGAAAAGGGAAAACCTAAACCTACTATACCTGTGGGGAATTCGGGGGTTGATGATGGTGGGGAGAGGGAATGTAAAAATGAATTTGTTTTTGGAAAGAAGGATTCTTCTGGGGACATGAATAGAGGTGTTAAAATGTCTAGTTTTAATGTAGAAAAGCAGGAATCTGTTGGCAGCATGAGAAGTTTGGATAATGGAAGCTGTGTTTTTCATGCCGAGACAGAAACATACAGTAATCTTGGTAATGATGCTGATAAGCGTGGTAATTTGGGTAATGATATTAAGTCTAAGAATGGAAATGGAAGTACTAATGGTATTTCTTCTACTTATAATGGCATTCATGTACGTCAAGTAGTAGATGAGATAAAGAAGCTGAACATCAACCATCCTGAGGGTGTCCATATTCCTAGTCATTCGACAAATTCACATGTACATAGTAGCAATGGTTTTGTGTTTGGAGGAAGTGGCAATGTTTCTAGCTGTTTCAGTGTTAGTTCAGGATCTAATACTACTGGAGGTCAACAGTTGCATGCTAATGATGATTTTGAGAATATTGGTGGCCAATATACTGAAGATTGCAGAACAAATGATGTTCAAAATGGAACTGCTGATGGTAACGCCCGGGATGCTGCAGCCACTGGAATACCTTGTTCTAAGACATCCACTAGTCAGGACGGGACCAAAGATTTCCAATGTGGCAAAATTCCAGAATTTCAAGTGTCTGAAGATGCCCAAGTGAATGGAGCTGAACAGTCTTATACGGACTTTAAACCCCCGACATGGGATCCTTCTAGTTTTAAAGAAAACTTATTTTGTAAGTTAAATGAAAAAGTTCAATCCACACAAAACAGTAAATCTTCCAAAGAAAAAGGATCAAAGTGTACGAGGCAAAAATTGAAGTCACGTTCCTTGAATAAGAAACAGACAAAGCTGGACCATTTGCCAAAGGAAAGCTGTTCACTTGAAACCCCCGAGTCTTCTGGCGGCTTCTCTCCGATGGATTTTTCTCCCTATCAAGAAGCCTCGGCAGAAGATGAAGATGTAAAGGCTTCAGAAGAATTAAATGTTCTTCACTCAACAATTCCTACCGATTTAAAAGACGAATGTTCGGCTGCTATAGGAAGAGAATACATCAACTCAGATGTTCAGAGATGTAGAGATCTTGGTAATGACGAGTCCTGTTATGGAGGTTCTTCTTTAGGTGATGTTCCTTCTTCTGGCCCCGAAATAATCTGGCCTAAGATGCAAACTGAAGTGTTCAGTAGCAGTAGTACTGCCGGTGTTTCGGAAGATGCCGGGGTTGACTTCACCTCAAACTCTGAAAAGAAAAAGTCTGAAATGTTTTGTTTTGATAATGGTCTGGGTGATTTGAAGGAGAAAGATTTTTCATTTTCAGCAGGGTCCACTGTAGAGATTTCTTCATTATTTAGGCCTAAGCAGAAGAAGAAATTTAGGGGGAAAGTTGGTCGTGACTCATTTGTCATCTCTCCAAATGTGAATGGAAAATCTGTATCTTCTTTACAATTTTCACCACTTACTACGGCCAACATGTCATCACATTCTGATGTGACAGATAGGTCTCACATGAATAATCAGTTCGAGGAAGAGGGCGATACGTCATCAGATACAATTCAAGCAGCCTGTTACCAATGGAGACTCAGGGGGAACCGTGCTCATAAAGCTAAGGATCTTTCTAAAGCTGAGGAATGCTACACACAAGGAATAGTTTCTGTTCCTTCCAATAAAAGATCAGGATCCTGCATTAAGCCTCTTTTACTCTGCTATAGCAACCGTGCAGCAACACGTATGGCTCTAGGAAGGATTAGAGAAGCTCTAGAGGATTGCATGATAGCATCTTCTCTGGACCCCACCTTTCTGAAAGTACAGATTAGAGCTGCTAACTGCCACCTTTTGCTAGGGGATGTTGAGAATGCTCAGCGGTGCTATAACAAGTGCTTGGAATCAGGTAAAGTTGTGTGTTTGGATCGGAGAGTAACAGTTGAAGCAGCTGAAGGTTTACAGAAAGCTCAGGAAGTGGCGAAGTGTATGAATGATGCTGCTAAACTTTTGAAGGAGAGAACTTCTGATGCAGGTGGTTCTGCTTTAGAACTACTTACGAAGGCATTGTCGAAGAGTTTATACTCAGAAAGATTGCTCCAAATGAAGGCCGATGCTCTCTATCTGCTGCAAAAGTATGATGCAGCAATTCAGCTATGTGACCAGAGTCTGAATCTTGCTGAAAAGAATTTTGCCTTGGCAAACAGTGCGAACAATTCTATGCATGATAGTTACTTAAGTGTAAAAATGTGGAGATGGTCATTTATATCTAAGTGTTACTTTCGTTTGGGGAGGCTTGATGCATCACTTAATGTTATTGAAAAGTTACAGCAAACAGCATCTGTCAATGACAAGTGTGTGATTGATAACATTGAAGAGTTGCTGTCATTAGCTGCTACAATACAAGACCTTCTAGATCACAGGAAAGCAGGAAATGAGAACTTCAAATTGGGAAAGTATACAGAAGCAGTGGAGAACTACACTGCTGCTTTATCTAGTAATATCAAATCACGCCCTTTTGCAGCAATATGTTTTGGCAACCGTGCTGCTGCACATCAAGCTTCAGGCCAAATAGCGGATGCCATTGCGGACTGCAGCATGGCTATGGCCCTTGATGGAAATTATGCAAAGGCAATTTCTAGAAGAGCCACCTTGCATGAGATGGTTAGAGATTATGAACAAGCAGCTTGTGACATCCGGAGACTTATTTCTGTTCTTGGATCTCAATCCAATGAAAAGGCCAAACATTCTGAATCTCCAAACGGATCAACTGGTGGCAAAGAATCAAGGCAAGCTCAACAACGTCTGCTTACTGTGGAAGATCAAGCCAAAATGAGGACCCCCTTGGACTTTTATCTCATCTTAGGTATTAAACCAGCTGATACAGCAGCTGATATCAAGAAAGCATATCACAAGGCAGCTCTCAGACATCATCCTGACAAGGCTGGTCAGTTGTTGGCAAGAAGTGAAGTTGGGGATGAAGGTGTTTTCTGGAAAGAAATTTCTCAGGAGGTGCACAAGGATGCTGATAGGCTTTTCAAAATGATTGGAGAGGCATATGCTGTACTTTCAGACCCTGCCAAGCGCTCGGAGTATGATATGGAAGAGGACATAAGGAAACTTTATAAACAAAGTAACAAAGGTGGCGCCTGCAGGAGATCTTCAGACGTTTATGGGAATGGAAGATCATCCGATAGTTATAGATCTTCCTATGATAGAGGTTATAGCAGACGATATGGACATTGGAGCACATATGGAGATTCCTATTCTCGATGGTAA 3939 0.4217 MSPAPINSSADTTPHTPTPIHFAPFNADAIKPPASTARARSRPRLAKLRKQSASQTTRSRSRTASAVTGFNPFRSDQVCSGSDTCETGMNGSEGFVFGARKVDSDSVRDLKNSEEEKETEVRKSGSVEFVFNADEIYAKLDSLFDGEEKSSENEGKKVSGEEREKLNSEREKLNSEREKGEVNVTGFVFSAGRNDNPSSLNTEKGKPKPTIPVGNSGVDDGGERECKNEFVFGKKDSSGDMNRGVKMSSFNVEKQESVGSMRSLDNGSCVFHAETETYSNLGNDADKRGNLGNDIKSKNGNGSTNGISSTYNGIHVRQVVDEIKKLNINHPEGVHIPSHSTNSHVHSSNGFVFGGSGNVSSCFSVSSGSNTTGGQQLHANDDFENIGGQYTEDCRTNDVQNGTADGNARDAAATGIPCSKTSTSQDGTKDFQCGKIPEFQVSEDAQVNGAEQSYTDFKPPTWDPSSFKENLFCKLNEKVQSTQNSKSSKEKGSKCTRQKLKSRSLNKKQTKLDHLPKESCSLETPESSGGFSPMDFSPYQEASAEDEDVKASEELNVLHSTIPTDLKDECSAAIGREYINSDVQRCRDLGNDESCYGGSSLGDVPSSGPEIIWPKMQTEVFSSSSTAGVSEDAGVDFTSNSEKKKSEMFCFDNGLGDLKEKDFSFSAGSTVEISSLFRPKQKKKFRGKVGRDSFVISPNVNGKSVSSLQFSPLTTANMSSHSDVTDRSHMNNQFEEEGDTSSDTIQAACYQWRLRGNRAHKAKDLSKAEECYTQGIVSVPSNKRSGSCIKPLLLCYSNRAATRMALGRIREALEDCMIASSLDPTFLKVQIRAANCHLLLGDVENAQRCYNKCLESGKVVCLDRRVTVEAAEGLQKAQEVAKCMNDAAKLLKERTSDAGGSALELLTKALSKSLYSERLLQMKADALYLLQKYDAAIQLCDQSLNLAEKNFALANSANNSMHDSYLSVKMWRWSFISKCYFRLGRLDASLNVIEKLQQTASVNDKCVIDNIEELLSLAATIQDLLDHRKAGNENFKLGKYTEAVENYTAALSSNIKSRPFAAICFGNRAAAHQASGQIADAIADCSMAMALDGNYAKAISRRATLHEMVRDYEQAACDIRRLISVLGSQSNEKAKHSESPNGSTGGKESRQAQQRLLTVEDQAKMRTPLDFYLILGIKPADTAADIKKAYHKAALRHHPDKAGQLLARSEVGDEGVFWKEISQEVHKDADRLFKMIGEAYAVLSDPAKRSEYDMEEDIRKLYKQSNKGGACRRSSDVYGNGRSSDSYRSSYDRGYSRRYGHWSTYGDSYSRW 1312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04335 1312 ProSitePatterns Nt-dnaJ domain signature. 1233 1252 IPR018253 -
Vivi6g04335 1312 SUPERFAMILY TPR-like 751 950 IPR011990 GO:0005515
Vivi6g04335 1312 SUPERFAMILY TPR-like 1027 1124 IPR011990 GO:0005515
Vivi6g04335 1312 Coils Coil 156 183 - -
Vivi6g04335 1312 SUPERFAMILY Chaperone J-domain 1151 1252 IPR036869 -
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 482 546 - -
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 1129 1153 - -
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 189 205 - -
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 1268 1293 - -
Vivi6g04335 1312 Pfam Tetratricopeptide repeat 830 855 IPR019734 GO:0005515
Vivi6g04335 1312 PRINTS DnaJ domain signature 1172 1190 IPR001623 -
Vivi6g04335 1312 PRINTS DnaJ domain signature 1228 1248 IPR001623 -
Vivi6g04335 1312 PRINTS DnaJ domain signature 1190 1205 IPR001623 -
Vivi6g04335 1312 Gene3D Tetratricopeptide repeat domain 877 1022 IPR011990 GO:0005515
Vivi6g04335 1312 SMART dnaj_3 1169 1248 IPR001623 -
Vivi6g04335 1312 ProSiteProfiles dnaJ domain profile. 1170 1256 IPR001623 -
Vivi6g04335 1312 Gene3D Tetratricopeptide repeat domain 738 876 IPR011990 GO:0005515
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 1 81 - -
Vivi6g04335 1312 CDD DnaJ 1170 1245 IPR001623 -
Vivi6g04335 1312 Gene3D DnaJ domain 1157 1273 IPR036869 -
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 48 81 - -
Vivi6g04335 1312 PANTHER HEAT SHOCK PROTEIN DNAJ WITH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 14 1312 - -
Vivi6g04335 1312 SMART tpr_5 827 860 IPR019734 GO:0005515
Vivi6g04335 1312 SMART tpr_5 970 1003 IPR019734 GO:0005515
Vivi6g04335 1312 SMART tpr_5 1062 1095 IPR019734 GO:0005515
Vivi6g04335 1312 SMART tpr_5 793 826 IPR019734 GO:0005515
Vivi6g04335 1312 SMART tpr_5 1024 1057 IPR019734 GO:0005515
Vivi6g04335 1312 SMART tpr_5 917 950 IPR019734 GO:0005515
Vivi6g04335 1312 SMART tpr_5 1096 1129 IPR019734 GO:0005515
Vivi6g04335 1312 SMART tpr_5 749 782 IPR019734 GO:0005515
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 506 520 - -
Vivi6g04335 1312 Gene3D Tetratricopeptide repeat domain 1024 1142 IPR011990 GO:0005515
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 145 179 - -
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 1 16 - -
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 103 122 - -
Vivi6g04335 1312 Coils Coil 874 894 - -
Vivi6g04335 1312 Pfam DnaJ domain 1170 1253 IPR001623 -
Vivi6g04335 1312 MobiDBLite consensus disorder prediction 145 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04335 Vivi-Chr6 143605224 143616863 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04335 K09527 - gmx:100809278 1376.69