Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04217 ATGGGTTCACTAGAAAGGTCAAAGAAAAAAACACATTTATGGAAAAAAGCCATGCTTCATTTTTCTCTATGTTTTGTCATGGGTTTTTTCACAGGCTTGGCACCAACAGGTAAATCTTTGATTTTTTCTAGCAAAATCGAAGTTGCATTCGCAGTTTCAAATGTAACAGAATTCGTAACAGCAGCACCTCAACCTTCTCAAGTTTCAACGAAAAATAGTAACAAAAGTTCGATAGATTCTGATTCAGCATCAAATATTCATATCGAAAAAACAACGTTGCATGCAAAACCACTACCTCAGATAAAGCCGAAAAGACTTGTTATCATAGTAACTCCAACCAGCAAAAAACTACCTTATCAGAATGTTTTTTTGAGAAGGTTGGCAAATACTATAAAGCTCGTTGATCAACCGGTGCTTTGGATCGTCGTTGAAGCGAAAACTGATTCGCCCGAATTGTCGGAGATTTTAAGGAAAACTGGTATCATGTATAGACATGTTGTTTTTAATGAAGAGTTTGAGGATTTAGAAGCTGAATTGAATCATCAGAGAAATTTAGCACTTAGTCACATTGAACATCATAGATTGAGTGGGATTGTTCATTTTGCTGGACTTTCAAATGTTTATGATCTTCAATTCTTTCAACAACTTAGAGATATTGAGGTCTTTGGGACATGGCCAACAGCATTATTACTAGCAAACAGAAAAAGAGTAATACTTGAAGGACCAGTATGTGACTCATCTCAAGTAATTGGATGGCATTTAAGAAATATGAACAATGAAACAATAACTCCTCCCATTCATATTTCAAGTTTTGCATTCAATAGCTCCATTTTATGGGACCCTGAAAGATGGGGTAGAACTTCATCAGTTAAAGACACTTCTCAGAATTCAATCAAGTTTGTGAAGCAAGTAGTTCTAGAAGATGAAACTAAGTTGAAGGGAATTCCACCATATTGCTCCAAAATATTGTTATGGCGTTTCAACTTCTATGCTCGTGCCATTTCCAAGCATTAA 1014 0.356 MGSLERSKKKTHLWKKAMLHFSLCFVMGFFTGLAPTGKSLIFSSKIEVAFAVSNVTEFVTAAPQPSQVSTKNSNKSSIDSDSASNIHIEKTTLHAKPLPQIKPKRLVIIVTPTSKKLPYQNVFLRRLANTIKLVDQPVLWIVVEAKTDSPELSEILRKTGIMYRHVVFNEEFEDLEAELNHQRNLALSHIEHHRLSGIVHFAGLSNVYDLQFFQQLRDIEVFGTWPTALLLANRKRVILEGPVCDSSQVIGWHLRNMNNETITPPIHISSFAFNSSILWDPERWGRTSSVKDTSQNSIKFVKQVVLEDETKLKGIPPYCSKILLWRFNFYARAISKH 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04217 337 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 12 327 IPR005027 GO:0015018|GO:0016020
Vivi6g04217 337 Pfam Glycosyltransferase family 43 127 328 IPR005027 GO:0015018|GO:0016020
Vivi6g04217 337 FunFam Glycosyltransferases 105 337 - -
Vivi6g04217 337 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 106 337 IPR029044 -
Vivi6g04217 337 CDD GlcAT-I 105 329 IPR005027 GO:0015018|GO:0016020
Vivi6g04217 337 SUPERFAMILY Nucleotide-diphospho-sugar transferases 105 331 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04217 Vivi-Chr6 141706733 141709163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04217 1 332 Glycosyltransferase AT2G37090 59.829 5.39e-144 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04217 K20869 - gmx:100785607 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04217 6 141706733 141709163 Vivi6g04217 6 141706733 141709163 ECH