Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04193 ATGGCAAAGCTATTCCATTTCCTTCCTCTTTTCTGCCTCAACCTATTCTTCATTGTCACACTCTTTCAAACTGTTTCATCTCAAACAGCTACATCTCCAGCCCCATCAGGACCAACAAACATAACACAAGTCCTAGAAAAAGCAGGACAGTTCACAACATTCATCAAGCTACTTAAGGCGACACAAGTATCCGACCGTATCAATTCGCAGCTCAACAATTCAAACCAAGGCCTAACGATTTTCGCACCAACAGATAATGCATTCTCGAGCCTAAAATCCGGAACATTAAACTCGATAAGTACACAAAACCAGCTTCAACTTTTGCAGTTTCATATTCTACCTACACTTTACACAATCTCGCAGTTTCAAACTGCTAGTAACCCCTTACACACGCAAGCTGGAAACAGTGATGATGGAGAGTATCCTCTTAATGTTACTACTTCTGGAAATCAAGTTAATGTGACTACTGGTGTGGTTGATACAACTGTTTCTAATACTATTTATAGTGATAATCAGCTTGCAGTTTATCAGGTTGATCAAGTGCTTCTTCCCATGGCTCTTTTCGGACAAGCGCCGACGGCTGCTCCGGCTGAGGCGCCTGCACCGAGTAAGCCGGAGAAAAGTGTTCGGGCTTCTGATGCTCCGAAAGGGTCGAAGGATAGTCCGGCGGATGATTCTAGTGCTGTTGGTTTGAATGGCTATGCAGGTGTTACATTGTTTGCTGCAAATGTTGTTGTTTCTTATTTGATGATGTAA 756 0.4286 MAKLFHFLPLFCLNLFFIVTLFQTVSSQTATSPAPSGPTNITQVLEKAGQFTTFIKLLKATQVSDRINSQLNNSNQGLTIFAPTDNAFSSLKSGTLNSISTQNQLQLLQFHILPTLYTISQFQTASNPLHTQAGNSDDGEYPLNVTTSGNQVNVTTGVVDTTVSNTIYSDNQLAVYQVDQVLLPMALFGQAPTAAPAEAPAPSKPEKSVRASDAPKGSKDSPADDSSAVGLNGYAGVTLFAANVVVSYLMM 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04193 251 Gene3D FAS1 domain 19 185 IPR036378 -
Vivi6g04193 251 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 237 IPR045003 -
Vivi6g04193 251 FunFam Fasciclin-like arabinogalactan protein 11 20 184 - -
Vivi6g04193 251 SMART fasc_3 79 185 IPR000782 -
Vivi6g04193 251 Pfam Fasciclin domain 50 184 IPR000782 -
Vivi6g04193 251 MobiDBLite consensus disorder prediction 195 227 - -
Vivi6g04193 251 SUPERFAMILY FAS1 domain 36 184 IPR036378 -
Vivi6g04193 251 ProSiteProfiles FAS1/BIgH3 domain profile. 38 182 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04193 Vivi-Chr6 141407509 141408504 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04193 - - mtr:11427146 400.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04193 6 141407509 141408504 Vivi6g04193 6 141407509 141408504 ECH