Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04173 ATGGACATTCAGCATTCAAAATTCAAAAGAATCTGTGTTTTCTGTGGAAGTAGTCCTGGCAAAAAAACTAGCTACCAAGATGCTGCCATTCAACTTGGACAAGAATTGGTTTCAAGGAACATTGATCTTGTTTATGGAGGTGGAAGCATTGGTCTCATGGGTTTGGTTTCTCAAGCTGTTCATGATGGTGGTCGCCATGTCATTGGAGTTATTCCCAAGACACTCATGCCTAGAGAGCTAACTGGTGAAACTGTAGGAGAAGTAAAAGCTGTTGCTGATATGCATCAAAGGAAAGCTGAAATGGCTAAACATTCTGATGCTTTCATTGCTTTACCAGGTGGATATGGTACTCTAGAGGAGCTTCTTGAAGTGATAACATGGGCGCAACTTGGAATTCATGACAAGCCGGTGGGATTAGTAGATGTTGATGGATACTTTAACTCTTTGTTGTCCTTCATTGACAAAGCTGTGGAAGAAGGATTTATCAGTCCAAATGCTCGTCACATAATTGTATCCGCACCAACCGCGAAAGAGTTAGTCAAGAAATTGGAGGAATATGTTCCATGTCATGAGGGGGTTGCTTCAAAGTTAAGCTGGCAGATGGAACAGCAGCTAGCATACCCTCAAGATTATGACATCTCAAGGTAG 648 0.4198 MDIQHSKFKRICVFCGSSPGKKTSYQDAAIQLGQELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVDVDGYFNSLLSFIDKAVEEGFISPNARHIIVSAPTAKELVKKLEEYVPCHEGVASKLSWQMEQQLAYPQDYDISR 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04173 215 Gene3D - 2 185 - -
Vivi6g04173 215 Pfam Possible lysine decarboxylase 53 183 IPR031100 -
Vivi6g04173 215 PANTHER LOG FAMILY PROTEIN YJL055W 3 211 - -
Vivi6g04173 215 SUPERFAMILY MCP/YpsA-like 7 186 - -
Vivi6g04173 215 FunFam CASP-like protein 1 185 - -
Vivi6g04173 215 NCBIfam Rossman fold protein, TIGR00730 family 9 186 IPR005269 GO:0009691|GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04173 Vivi-Chr6 141052499 141055817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04173 K22522 - gmx:100810030 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04173 6 141052499 141055817 Vivi6g04173 6 141052499 141055817 ECH