Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04141 ATGGAGATCGATGAAGCGATTAGAGGCTGTGAGGATCGAAGACTTCAGACTAAGTATAATAATGCTACTAGTGTTATTCAGAGAGCTTTGGCTTTGTATCCAATTGAGGAGGTTGCTTTCAGTTTCAATGGTGGAAAGGATTCAACGGTTTTGTTGCACCTACTTAGGGCTGGCTATTTCTTGCATAAAGTGGGGCAAAATAGTGCTGCTGCCAATGGAGATGTTAAGGATTTTCCTATTCGAATAATATATTTTGAAAGCCCTAGTGCTTTCCCGGAAATCAACTCATTTACCTATGACACCGCTGCCACCTATGGTTTGCAAATTGACACCATCCGCTTAGATTTCAAGTCTGGTTTGGAGACTTTGCTGAAAGATAAGCCAATTCGAGCTATTTTCCTTGGAGTTCGAATGGGAGACCCTACTGCGGTTGGCCAAGAACAATTCTCCCCCAGTTCACCTGGTTGGCCACCTTTCATGAGAGTCAATCCGATTTTAGATTGGTCATACAGAGATGTCTGGGCCTTCCTTTTAACTTGCAAAGTGAAGTATTGCAGCCTTTATGATCAAGGATATACTTCAATTGGCAGCATATACGACACTGTTCCCAATTCCTTACTATCCATCATTAATTCTTCCAATAAATTCAAACCAGCATATTTACTTTCTGATGGAAGATTAGAGAGGGCAGGGAGGGTTAAAAGGAAATCTTCTGCTGGTGGACAACTTACTGCTGATAGCAATGGCTTGGATGTGCATAAAAACAGCACACTCACAGCATCAATCATTGCTGTGGGAGATGAGATTCTGTTTGGCATTGTTGAGGATCAGTTGGGACCATATTTATGTAGGAAGCTGGGTTCCATTGGTTGGTCTGTGTTGCATTGTTCTGTAGTTCACAATAATATAGATTCTGTGGCAGAAGAAGTTGAGCGACAGAAATCTAAGACTGATATGGTATTTATATATGGAGGTGTAGGTCCACTGCATTCAGATGTTACCTTAGCCGGCATTGCAAAAGCTTTTGATGTTCGTTTGGCTCCTGATGAAGAATTTGAAGAATATCTACGGTATATTATTGGTGATCAGTGTATTGGCGATAGGAATGAGATGGCTCAATTGCCCGAGGGCATAACTGAATTACTGCATCACGACAAGTTGGCTGTACCCTTGATGAAGTGCCAAAATGTAATAATTCTCAATGCAACAAACATTTCGGAGATGGAAAAGCAATGGGATTGTTTGGTTGAATTAACAAAGTCTAGTGACCTACTAACATTGCTGGAGCCATTCATATCAAAGCACATGACAACTAATTTATCTGATGTTGAAGTTGCTCAACCTCTGTCAAAGCTTTGTCTAGAATTCCCAGACCTTTATATTGGATGTTACCGCAAAGCCAGATATGGATCTCTCATAATAAGTTTCAAAGGAAAGGACCAAGCACGCCTTGAATTAGCTATAAAAGCATTGCAGAATAAGTTTAAATCCGGTGCTTTCTTGGAGATTAAGAAGGATGATTGA 1524 0.4062 MEIDEAIRGCEDRRLQTKYNNATSVIQRALALYPIEEVAFSFNGGKDSTVLLHLLRAGYFLHKVGQNSAAANGDVKDFPIRIIYFESPSAFPEINSFTYDTAATYGLQIDTIRLDFKSGLETLLKDKPIRAIFLGVRMGDPTAVGQEQFSPSSPGWPPFMRVNPILDWSYRDVWAFLLTCKVKYCSLYDQGYTSIGSIYDTVPNSLLSIINSSNKFKPAYLLSDGRLERAGRVKRKSSAGGQLTADSNGLDVHKNSTLTASIIAVGDEILFGIVEDQLGPYLCRKLGSIGWSVLHCSVVHNNIDSVAEEVERQKSKTDMVFIYGGVGPLHSDVTLAGIAKAFDVRLAPDEEFEEYLRYIIGDQCIGDRNEMAQLPEGITELLHHDKLAVPLMKCQNVIILNATNISEMEKQWDCLVELTKSSDLLTLLEPFISKHMTTNLSDVEVAQPLSKLCLEFPDLYIGCYRKARYGSLIISFKGKDQARLELAIKALQNKFKSGAFLEIKKDD 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04141 507 Pfam Probable molybdopterin binding domain 262 360 IPR001453 -
Vivi6g04141 507 Gene3D - 256 418 IPR036425 -
Vivi6g04141 507 Pfam Phosphoadenosine phosphosulfate reductase family 121 202 IPR002500 GO:0003824
Vivi6g04141 507 SUPERFAMILY Molybdenum cofactor biosynthesis proteins 258 366 IPR036425 -
Vivi6g04141 507 CDD PAPS_reductase 37 196 IPR002500 GO:0003824
Vivi6g04141 507 PANTHER FAD SYNTHETASE-RELATED FMN ADENYLYLTRANSFERASE 273 383 - -
Vivi6g04141 507 FunFam Phosphoadenosine phosphosulfate reductase family protein 256 415 - -
Vivi6g04141 507 Gene3D HUPs 4 236 IPR014729 -
Vivi6g04141 507 FunFam Phosphoadenosine phosphosulfate reductase family protein 4 236 - -
Vivi6g04141 507 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 13 191 - -
Vivi6g04141 507 SMART MoCF_biosynth_3a 261 393 IPR001453 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04141 Vivi-Chr6 140182575 140190091 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04141 - - gsj:114407107 856.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04141 6 140182575 140190091 Vivi6g04141 6 140182575 140190091 ECH