Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04107 ATGGAGCATATCCTGTGGCCTTTTCTGTTGAAGATGATTATACCACAGACCTACACTGGTTCTGTTGCCATGGTTTGCAGGTGCATCTCAGAACTGTGGCGGCATAGATCTTATGGTATTGATATGTTAAGTGAGTGTAGAGTCCGTCCTGATATTCCAACTGCCGAAGAAATTCTTGCTCGTTTTGTGGTGCTTTTACATGATCCTCTAGCAAGGGAGCAATTAGCCACCCAGATTTTGACAGTCCTATGTCTTCTGGCACCTCTATTTCCGAAAAATATCAATTTGTTTTGGCAAGATGAGATTCCTAAGATGAAGGCGTATGTTAGCGATACAGATGACTTGAAACAAGATCCATCATATCAAGACACTTGGGATGACATGATAATCAACTTTCTTGCAGAATCTTTGGACGTGATTCAAGATGCAGATTGGATTATGTCTCTTGGAAATGTATTTGCCAAACATTATGAACTTTATACATCTGACGATGAACATGCTGCACTTCTTCACCGATGCTTAGGGATTCTGCTTCAAAAGGTTAATGACAGAGCTTATGTCCATGATAAAATGAATTGGATGTATAAGCAATCAAACATTGCAATCCCAACAAATAGGCTTGGTTTGGCAAAAGCAATGGGATTGGTTGCTGCATCTCACTTGGATACAGTGTTGGAGAAGCTGAAGGATATTATAGACAATGTTGGACAAACCATTATTCAGAGGTTTATGCCAGACTTGATATTGTCATTGTTCTCTGATAGTTACAGAACAGTAGAGTCTGATGATATACATGCTGCTTTGGCTTTAATGTATGGATATGCTGCAAAGTATGCCCCATCATCAGTTATTGAAGCCAGAATAAACGCCCTTATTGGCACCAACATGCTTTCAAGGCTGCTTCATGTGCGTCACCCTATAGCAAAGCAAGCTGTTATCACTGCAATTGATTTACTTGGTAATGCTGTCATTAATGCTTCTGAAAGTGGTGCGCCGTTTCCATTAAAAAGAAGGGACCAACTGCTTGATTATATTTTAACTTTAATGGGACGAGATGATAATGATGGTTTTGCTGATTACAATGAACTCTTGCGTACTCAGGCTCTTGCATTAAGTGCCTGCACTACATTGGTCTCTGTGGAGCCAAAGCTTACAGTTGAAACCAGAAACTATGTGATGAAGGCCACATTGGGATTCTTTGCAATACAAAATGATCCAGTTGAAGTTGTCAGTCCCCTTATTGACAATCTGATCTCTCTTTTATGTGCAATTCTTCTCACTGGTGGAGAGGATGGAAGAAGTCGAGCAGAGCTGCTAATGCTTATCCTTAGGCAAATTGATCAATTTGTCTCTTCACCTGTTGAATATCAGAGGAGAAGAGGATGTCTTGCAGTCCATGAGATGCTTCTCAAATTTCGGATGGTTTGTATTAGTGGCTATTGCGCACTGGGATGCCATGGGAATTGTGCACATACCAAGCAAGTTGACCGTACTCTTTATGGGAATTTTTCTAATCTACCATCTGCATTTGTATTGCCAAGTCGCGAAGCTTTGTGCCTGGGAGATAGGGTAGCAATTTATCTTCCACGTTGTGCCGACACAAATTCTGAAGTCCGAAAAGTATCAGCACAAATTCTTGATCAACTCTTCAGTATTTCTCTTTCTCTTCCAAAGCCTCCTGGTTTGTCTATATCTGCCGAAGACATAGAATTGTCATACCGTGCTTTGTCTTCTCTTGAAGATGTGATAGCCATGCTGAGAAATGATACCTCTATTGATCCATCAGAAGTTTTCAACAGAATCATTTCCTCCCTCTGCATTCTGTTGACAAAGGATGAGCTGGTTGCTATGCTTCATGGTTGCTCAGTAGCTATATGTGATAAGATCAAGCAGTCTGCCGAAGGAGCCATTCAAGCTGTTGTTGAGTTTGTTACAAGGAGAGGGAGTGAACTGACAGAAATTGATATCTCAAGGACAACACAATCATTGATCTCTGCCACTGTGCATGCAACCGATAAGCATTTACGTGTGGAAACTCTTGGTGCTATTGCCTCTTTGGCCGAAAATACTAGTGCAAAAACTGTTTTTGATGAAGTCCTAGCCACTGCTGGAAAGGATATAATAACGAAGGATATATCTAGGCTGCGTGGTGGATGGCCCATGCAGGATGCATTCTACGCCTTTTCACAGCACATGGTTCTATCAGTGTTATTTTTAGAACATGTGATATCTGTCCTTAGCCAGATTCCTATCCTTAAATGTGATGTAGACAGAGTTGAGGATAGCCAGGTCCAGAATCATACAGAAGATGGGCAACTGGAAGCTGCAATTTTTGCTCTTACTGCTTTTTTCAGAGGTGGGGGAAAAGTTGGAAAAAGGGCTGTTGAACAAAACTATGCTTCTGTTCTTTCTGAGCTTATGCTGCAACTTGGAAGCTGTCATGGGGTAGCTTACTCTGGTCACCTTGAACCATTGCGGAATCTTCTGACTGCATTCCAGGCATTCTGCGAATGTGTTGGTGACCTTGAGATGGGAAAGATTTTAGCCAGAGATGGGGAACTTTCTGAAAATGAGAGGTGGATTCATCTCATTGGAGACATAGCCGGATGCATATCTATAAAGAGGCCGAAAGAGATCCAAAATATTTGCCAATTTTTCAAAAGATCGTTGGATCGACCCCAGAAATACCAAAGGGAAGCTGCTGCTGCTGCCTTGTCAGAATTTGTTCGTTATAGCGGTGGACTTGATTCGCTTTTGGAGCAAATGGTTGATGTTTTATGCAGACGTGTATCAGATGAGTCTTCTACTGTTCGGCGCTTTTGTTTGAGAGGATTAGTACAGATCCCATCAATTCATATTCTGAAGTATACAGCTCAAGTCCTGGGTGTTATATTAGCTCTGCTAGATGATTCTGATGAATCTGTACAATTAACTGCAGTGTCATGCTTACTTATGATTCTCGAATCTTCACCTAATGACGCAGTTGAGCCTATTTTGCTTAATCTTTCAATACGGCTTCGAAATCTTCAAACAAGCTTGAATGCGAATATGCGAGCCAGTTCCTTTTCAGCATTTGGGGCACTAAGTAACTATGGAGAAGGGGCGCTAAGAGAGGCATTTGTTGAGCAGGTACACGCAGCTATTCCTCGTCTGGTTTTGCATCTGTATGACGAAGATGTTAGTGTCCGACTTGCCTGCCGGAATACCCTGAGACGAGTTTTCCCATTGATAGAAATTGAAGGATTGCTTGCCCTGCTAAACACACCGAGTTTCCTTTCTGATCATCGAAGTGACTATGAGGACTTTCTACGAGATATTGCAAAGCAATTTACGCAGCATCTTCTTTCCAGAGTTGATACTTACATGGCGTCAACAGTGCAGGCTTTTGATGCACCATGGTCCATAATTCAAGCAAATGCTATGTACTTATGTAGTAGCATGCTCTCTCTATCGGATAATCAGCATATTTTAGCTGACTACCATACACAGGTATTTGGTATGCTGGTTGGAAAGATGAGTCGATCACCTGATGCTGTTGTAAGGGCGACATGTTCTTCTGCTTTGGGCTTGTTGCTCAAATCTTCCAACTCATGTTCATGGAGAGCAGATCATCTTGATCGATTAGAATCGACAAAAAGTAACCATGATGCGGCGGAGTCCCATGATAAACTAGCAACTACTCAATAA 3687 0.4174 MEHILWPFLLKMIIPQTYTGSVAMVCRCISELWRHRSYGIDMLSECRVRPDIPTAEEILARFVVLLHDPLAREQLATQILTVLCLLAPLFPKNINLFWQDEIPKMKAYVSDTDDLKQDPSYQDTWDDMIINFLAESLDVIQDADWIMSLGNVFAKHYELYTSDDEHAALLHRCLGILLQKVNDRAYVHDKMNWMYKQSNIAIPTNRLGLAKAMGLVAASHLDTVLEKLKDIIDNVGQTIIQRFMPDLILSLFSDSYRTVESDDIHAALALMYGYAAKYAPSSVIEARINALIGTNMLSRLLHVRHPIAKQAVITAIDLLGNAVINASESGAPFPLKRRDQLLDYILTLMGRDDNDGFADYNELLRTQALALSACTTLVSVEPKLTVETRNYVMKATLGFFAIQNDPVEVVSPLIDNLISLLCAILLTGGEDGRSRAELLMLILRQIDQFVSSPVEYQRRRGCLAVHEMLLKFRMVCISGYCALGCHGNCAHTKQVDRTLYGNFSNLPSAFVLPSREALCLGDRVAIYLPRCADTNSEVRKVSAQILDQLFSISLSLPKPPGLSISAEDIELSYRALSSLEDVIAMLRNDTSIDPSEVFNRIISSLCILLTKDELVAMLHGCSVAICDKIKQSAEGAIQAVVEFVTRRGSELTEIDISRTTQSLISATVHATDKHLRVETLGAIASLAENTSAKTVFDEVLATAGKDIITKDISRLRGGWPMQDAFYAFSQHMVLSVLFLEHVISVLSQIPILKCDVDRVEDSQVQNHTEDGQLEAAIFALTAFFRGGGKVGKRAVEQNYASVLSELMLQLGSCHGVAYSGHLEPLRNLLTAFQAFCECVGDLEMGKILARDGELSENERWIHLIGDIAGCISIKRPKEIQNICQFFKRSLDRPQKYQREAAAAALSEFVRYSGGLDSLLEQMVDVLCRRVSDESSTVRRFCLRGLVQIPSIHILKYTAQVLGVILALLDDSDESVQLTAVSCLLMILESSPNDAVEPILLNLSIRLRNLQTSLNANMRASSFSAFGALSNYGEGALREAFVEQVHAAIPRLVLHLYDEDVSVRLACRNTLRRVFPLIEIEGLLALLNTPSFLSDHRSDYEDFLRDIAKQFTQHLLSRVDTYMASTVQAFDAPWSIIQANAMYLCSSMLSLSDNQHILADYHTQVFGMLVGKMSRSPDAVVRATCSSALGLLLKSSNSCSWRADHLDRLESTKSNHDAAESHDKLATTQ 1228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04107 1228 SUPERFAMILY ARM repeat 535 1194 IPR016024 -
Vivi6g04107 1228 Gene3D - 874 1196 IPR011989 -
Vivi6g04107 1228 Pfam non-SMC mitotic condensation complex subunit 1 916 1032 IPR032682 -
Vivi6g04107 1228 PANTHER MAESTRO-RELATED HEAT DOMAIN-CONTAINING 1 1201 IPR045206 -
Vivi6g04107 1228 SUPERFAMILY ARM repeat 7 588 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04107 Vivi-Chr6 139515723 139541757 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04107 K24816 - gmx:100800961 2116.66