Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04058 ATGTTTCAACCCCACCACCGTACAACAACCACATTCGCGCGCGATTCAACTTCCGATTCCTCTGTTTTTGACTCCTTCCGTTACCACAGCACCACCGCAATGACACACAAACAACGCTTCAAGCGAGTTGCAAAACCCATATTACACCTTCCACGAACCAAACCCACACGTAAACCGCGGCTTTCCAAATCAAAACCCAAACTCACCGCTCCTGAATCCAACCCATCATCAGAACCGCACATTTCATTCCAAAAAACAGAAACTTTACCCCGCGAATTCTTCGAAATCGACGCACTAGACCTTGCCCCTCGTTTGCTCGGAAAGTTTCTTCGCAGAGACGACGTCGTTCTTCAGATTACCGAGGTTGAAGCATATAGATCACATGACACAGCTAGTCATGCTCGGTTTGGTATTACTCCAAGAACTGCTCCTCTTTTTGGACCGGGTGGGCACGCATATGTTTATCTTTGCTATGGACTTCATGTGATGCTGAATGTTGTTGCCGATAAGGAAGGAGCTGGAGGTGGTGTTTTGATACGTTCTTGTGCCCCCGTTTGTGGATTGGAGGTTATTCAACATCGGCGAGGTCAAATAACGGATAAACCTATACTTCTTACAGGACCCGGGAAGGTTGGTCAGGCTCTAGGTCTTTCAACTGAATGGTCAAATCATCCCCTTTATACCCCTGATGGTTTAGAACTCTTAGATGGTCCAGAGCCCGAAAACATATTGGTAGGTCTGCGTGTTGGTATCCAGTACGCACTGCCAGAGCATGTCGACGCACTGTGGAGATTTGCCATTGCAGGTTCCGCTTGGATTAGTGCTCCAAGAAACACTCTCAGGCCACCCTTGTAG 855 0.4795 MFQPHHRTTTTFARDSTSDSSVFDSFRYHSTTAMTHKQRFKRVAKPILHLPRTKPTRKPRLSKSKPKLTAPESNPSSEPHISFQKTETLPREFFEIDALDLAPRLLGKFLRRDDVVLQITEVEAYRSHDTASHARFGITPRTAPLFGPGGHAYVYLCYGLHVMLNVVADKEGAGGGVLIRSCAPVCGLEVIQHRRGQITDKPILLTGPGKVGQALGLSTEWSNHPLYTPDGLELLDGPEPENILVGLRVGIQYALPEHVDALWRFAIAGSAWISAPRNTLRPPL 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04058 284 MobiDBLite consensus disorder prediction 46 64 - -
Vivi6g04058 284 MobiDBLite consensus disorder prediction 67 83 - -
Vivi6g04058 284 CDD AAG 93 274 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vivi6g04058 284 Hamap Putative 3-methyladenine DNA glycosylase. 91 274 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vivi6g04058 284 SUPERFAMILY FMT C-terminal domain-like 87 280 IPR011034 GO:0003824
Vivi6g04058 284 Gene3D - 84 281 IPR036995 GO:0003677|GO:0003905|GO:0006284
Vivi6g04058 284 FunFam Putative 3-methyladenine DNA glycosylase 84 282 - -
Vivi6g04058 284 MobiDBLite consensus disorder prediction 46 83 - -
Vivi6g04058 284 NCBIfam DNA-3-methyladenine glycosylase 89 274 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vivi6g04058 284 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE 64 282 IPR003180 GO:0003677|GO:0003905|GO:0006284
Vivi6g04058 284 Pfam Methylpurine-DNA glycosylase (MPG) 92 270 IPR003180 GO:0003677|GO:0003905|GO:0006284
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04058 Vivi-Chr6 138109310 138111577 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04058 K03652 - gmx:100813424 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04058 6 138109310 138111577 Vivi6g04058 6 138109310 138111577 ECH