Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04044 ATGTCTGGAAAAGCAACAACCTCGAATCATAATATAGGTCTGAGGGGATCTGGAGGTCTTTCACATGCTTACATTCAGTATCCACCGCTTCGATGTAATGTTCCTGGATCGGGGGGATTATTTTATGATGATGGAAATAAGTTGCTACTCTCCCCAACTGCTGACCAGGTCTTTTCATGGAAAGTCAGTCTATTTGATCCTCTCATTGGTCCCACCACTGACTCAATAAGTGAAGGCCCTATTATAGCTATTCGGTATTCTTTAGACACAAAGGTTATAGCAATCCAGCGATCAAGCCATGAGATACAATTTTGGGATAGAGAAACTGCGGAAACGTTTAGCCACACGTGCAGGACAGAATCAGAAAGTATACTTGGATTTTTTTGGACAGACAGTCAACAATGCGATATTGTTATTGTTAAGACCACTGGTCTAGACTTGTGTGCATATAAATCAGAGTCGAAATCACTCCAACTAGTGGAAACAAAGAAACTGAATGTTAGTTGGTATGTTTACACACATGAAAGCCGCCTGGTTCTTCTTGCTTCTGGAATGCAGTGCAAGACATTCCACGGATTTCAGATTTCATCTGCAGATGTTGTTCGCTTACCAAGGTTTGAGATGGTTATGGCCAAATCTGAGGCAAATAGTAAGCCCGTTTTAGCAGCTGAAGACATCTTCATTGTTACTGTTTATGGTAGGATATACTGCTTGCAAGTTGATAGAGTTGCAATGCTACTCCATTCCTATAGGCTATATCGTGATGCAGTGATACAACAGGGATCTTTGCCAATTTATTCCAGCAGGATTGCTGTGAGTGTGGTCGACAATGTACTTCTTATTCATCAAGTTGATGCAAAGGTTGTTATACTTTATGATCTCTTTGCAGATTCTCGAGCACCAATATCTGCACCACTTCCTTTGTTGTTAAGGGGTTTACCCAGGTCCAGTTCTTCATCTCAATTTAGTGGTAGAGAAAGTGAAAGTTCAGATGTTAATGTTGTGAGTAGCCATGAAACAGTTACATATGCCGATACATGGAATTTCCTAGTCCCTGATTTCGTGTGCGATGTGACCAATAAGCTATTGTGGAAATTCAATTTAGACTTAGAAGCAATTTCTGCCAGTAACTCAGATGTCCCATCAGTATTAGACTTCCTGCAGCGGCGAAAGTTGGAAGCTAACAAGGCTAAACACTTGTGCTTGGGTATAACACAGACACTTATTCTAGAGCACAGACCTGTGCATGTGGTTGCCAAGGCTATAAATGTACTAGTTACCTCGTACTCCCATTCAATTAAAACTTGTAGCTTACTGAAGGGGCTGAAACCAGAGATGACATTAAACTCCAGTGCACAAAATGCTGACGCTGATGTATCTGCTATAGAAAGTGATGCAATTGGGAAATCAATCGTACATGAATCTACCACTAGAGTTGACAGTGGAACGTTGGATTCTGAGGATGAATCACAGTTTGCAAATCTTAAACACAATTCAAAAGAGGCCCTTGTTGGGGGTAGTGTAAACAATGCGAACTCCCCTCGTAACGAAGCTCATAGTTCTTATGCTATGCAATCATCTTTATTGTCTGCCCAAGAGGATTCCCAACTTACTTCAGCAGCAATTTCACCAGATGAGATGTACAACTTTGTCTTTTCTCCTGTTGATGAAGAGATGGTGGGAGATCCTTCTTACTTGGTTGCTATAATTATTGAGTTTCTTCACAGTGCAAATTTGGAAAAGATTCGTGTGGCCCCAAATCTATATGTATTGATAATTCAACTTCTGGTGCGGAATGAACGTTATGCTGAATTGGGGTTGTTTGTCGTAAATAAGATTTTGGAGCCTTCTAAGGAAGTTGCACTGCAACTCCTCGAGTCTGGACGTCAGAACACCCAAACTAGGAAGCTTGGTCTGGATATGCTGAGACAGCTGGGCTTACATAATGATTATGTATTGCTGCTAGTGCAAGATGGATACTACCTTGAAGCCCTGCGATATGCACGGAAGTACAAGGTGGATACCATCCGACCGTCATTGTTTTTAGAAGCCGCTTTTGTATCCAATGACTCCCAACATCTTGCTGCAGTTCTAAGATTCTTTACAGATTTTCTTCCTAGCTTCAAAAACACCTCAGAGCATAATAGATACTACCGCATACTGAATGAGATGAACTCTTCCATGACTGTTTGA 2193 0.4122 MSGKATTSNHNIGLRGSGGLSHAYIQYPPLRCNVPGSGGLFYDDGNKLLLSPTADQVFSWKVSLFDPLIGPTTDSISEGPIIAIRYSLDTKVIAIQRSSHEIQFWDRETAETFSHTCRTESESILGFFWTDSQQCDIVIVKTTGLDLCAYKSESKSLQLVETKKLNVSWYVYTHESRLVLLASGMQCKTFHGFQISSADVVRLPRFEMVMAKSEANSKPVLAAEDIFIVTVYGRIYCLQVDRVAMLLHSYRLYRDAVIQQGSLPIYSSRIAVSVVDNVLLIHQVDAKVVILYDLFADSRAPISAPLPLLLRGLPRSSSSSQFSGRESESSDVNVVSSHETVTYADTWNFLVPDFVCDVTNKLLWKFNLDLEAISASNSDVPSVLDFLQRRKLEANKAKHLCLGITQTLILEHRPVHVVAKAINVLVTSYSHSIKTCSLLKGLKPEMTLNSSAQNADADVSAIESDAIGKSIVHESTTRVDSGTLDSEDESQFANLKHNSKEALVGGSVNNANSPRNEAHSSYAMQSSLLSAQEDSQLTSAAISPDEMYNFVFSPVDEEMVGDPSYLVAIIIEFLHSANLEKIRVAPNLYVLIIQLLVRNERYAELGLFVVNKILEPSKEVALQLLESGRQNTQTRKLGLDMLRQLGLHNDYVLLLVQDGYYLEALRYARKYKVDTIRPSLFLEAAFVSNDSQHLAAVLRFFTDFLPSFKNTSEHNRYYRILNEMNSSMTV 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04044 730 Pfam Colon cancer-associated protein Mic1-like 563 703 IPR009755 -
Vivi6g04044 730 PANTHER COLON CANCER-ASSOCIATED PROTEIN MIC1 19 725 IPR040371 GO:0010506|GO:0035658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04044 Vivi-Chr6 137939997 137948886 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04044 K24763 - gmx:100788425 1181.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04044 6 137939997 137948886 Vivi6g04044 6 137939997 137948886 ECH