Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04042 ATGGCAAAATCTTCATCATTCTCCATAACATTTTTCATCTCTATAATATCCTTTGCCACTGCCACTAAATACTATCAAAGCCTATCCCCAACAATGTTAGGTTTTCAAGAAGAAAAATTCACCCACCTTCACTTCTACTTTCACGACATCGTCACAGGCCCAAAACCAAGCATGGTATTTGTAGCCGAACCTAATGGTAAGGCAAAAAACGCCTTGCCATTTGGGACGGTTGTGGCGATGGACGATCCGTTAACGGCCGGACCCGAACGTGACTCGAAACTTGTAGGCAAGGCACAAGGAATTTATATTTCTATATCACAAGAAGAGATGGGACTAATGATGGTGATGACTATGGCGTTTTCAGATGGAGAGTTTAATGGAAGCACACTTAACATATTAGGTAGGAACATGATCATGAGTGAAGCTGTTAGAGAAATGGCCATTGTTGGTGGGACTGGAGCTTTTCGGTTCGTTCGTGGATATGCTCAGGCCAAGTTTTTTTCTGTTGATTTCACCACAGGAGATGCTATTGTGGAATATGATGTATTTGTGTTCCATTATTAA 564 0.4149 MAKSSSFSITFFISIISFATATKYYQSLSPTMLGFQEEKFTHLHFYFHDIVTGPKPSMVFVAEPNGKAKNALPFGTVVAMDDPLTAGPERDSKLVGKAQGIYISISQEEMGLMMVMTMAFSDGEFNGSTLNILGRNMIMSEAVREMAIVGGTGAFRFVRGYAQAKFFSVDFTTGDAIVEYDVFVFHY 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04042 187 PANTHER NUCLEOPORIN-RELATED 24 183 IPR004265 -
Vivi6g04042 187 Pfam Dirigent-like protein 41 185 IPR004265 -
Vivi6g04042 187 Gene3D - 32 177 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04042 Vivi-Chr6 137924018 137924870 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04042 - K25075 gmx:100817686 306.219