Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04035 ATGAAGATGGAAATCAAAGAGGATGTTGAAGGTGGTAAGCAGAAAATAATAACAGAACCATTGTTAGGTGAAAACAACAACCAACTTGTCCATGGAACCAAAGATCATGATCATCCTCATAATCATCCATGGATGGTTTACTTCACCACATTCATTGCTGTTTGTGGTTCTTATGAATTTGGTGCTTGTGCTGGATATTCATCTCCAACTCAAGATGCTATCAGGAAAGATCTAAGCCTGTCTTTGGCAGAATACTCCTTGTTTGGCTCTATCTTGACTTTTGGTGCAATGATTGGCGCGATAACAAGTGGTCCTATTGCTGATTTCGTTGGACGAAAGGGGGCAATGAGAGTATCAAGTGCTTTCTGTGTTGCAGGATGGCTTGTTATTTATTTTTCAAAGGGTCCAGTTCCTTTGGATATTGGGAGACTAGCAACAGGATATGGAATGGGAGTCTTTTCATTTGTGGTTCCTGTCTTCGTAGCAGAAATTGCACCAAAAGAACTCCGAGGAGCCCTCACTACTTTAAATCAATTTATGATTGTTACTGCTGTATCGGTTTCATTCATTATCGGAACAGTACTTTCATGGAGAGCTTTAGCAATAATTGGCCTGATTCCCACGGCTGTGTTGCTTTTGGGTCTGTTCTTAATTCCAGAGTCTCCTAGATGGCTTGCAAAGAAAGGGCGCGCAAAAGATTTTGTGGCAGCATTGCAAACACTTCGCGGTAAAGGTGCTGACATATCTCATGAAGCTGCCGAAATTCAGGATTATATAACTAGCTTAGAACTTCTGGCAAAACCGAAGATGCTGGATTTGTTTCAAAGAAGATATCTGCGCTCGCTTACAATTGGAATAGGGCTTATGGTTTGCCAGCAGTTTGGGGGAATCAATGGAGTTTGCTTTTATACAAGCAGTATTTTTGATCTTGCAGGATTTCCTTCGGCGACCGGGACTATAATTTATGCTATTCTTCAGATTATAATAACAGGTCTTGGAGCAGCCCTCATAGATAAAGCTGGAAGGAAGCCTCTACTTTTGGTGTCTGGATCAGGATTGGTTGCAGGATGTATATTTACAGCAGTTGCATTCTATCTTAAGGTTCATAATGTGGGCTTAGGGGCAGTCCCAGCACTGGCTGTAACGGGCATACTAGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTGATGTCCGAGATATTTCCTGTGAATATAAAAGGACAGGCGGGAAGCATAGCCACATTGGTGAACTGGTTTGGTGCATGGCTATGCTCTTATACTTTCAACTTTCTCATGAGTTGGAGCTCCTATGGTACATTCATTCTTTATGCTGCCATCAATGCACTAGCTATATTGTTTATAGTCGTAGCAGTTCCAGAAACCAAAGGTAAAAGCCTTGAACAGTTACAGGCAGCCATTAACGCGTAG 1446 0.4184 MKMEIKEDVEGGKQKIITEPLLGENNNQLVHGTKDHDHPHNHPWMVYFTTFIAVCGSYEFGACAGYSSPTQDAIRKDLSLSLAEYSLFGSILTFGAMIGAITSGPIADFVGRKGAMRVSSAFCVAGWLVIYFSKGPVPLDIGRLATGYGMGVFSFVVPVFVAEIAPKELRGALTTLNQFMIVTAVSVSFIIGTVLSWRALAIIGLIPTAVLLLGLFLIPESPRWLAKKGRAKDFVAALQTLRGKGADISHEAAEIQDYITSLELLAKPKMLDLFQRRYLRSLTIGIGLMVCQQFGGINGVCFYTSSIFDLAGFPSATGTIIYAILQIIITGLGAALIDKAGRKPLLLVSGSGLVAGCIFTAVAFYLKVHNVGLGAVPALAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGQAGSIATLVNWFGAWLCSYTFNFLMSWSSYGTFILYAAINALAILFIVVAVPETKGKSLEQLQAAINA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04035 481 CDD MFS_GLUT6_8_Class3_like 47 474 IPR044775 GO:0008643|GO:0051119
Vivi6g04035 481 ProSitePatterns Sugar transport proteins signature 1. 103 120 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi6g04035 481 ProSitePatterns Sugar transport proteins signature 1. 333 350 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vivi6g04035 481 NCBIfam sugar porter family MFS transporter 44 474 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi6g04035 481 FunFam sugar transporter ERD6-like 6 40 479 - -
Vivi6g04035 481 Pfam Sugar (and other) transporter 57 477 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vivi6g04035 481 Gene3D MFS general substrate transporter like domains 40 480 IPR036259 -
Vivi6g04035 481 ProSiteProfiles Major facilitator superfamily (MFS) profile. 45 468 IPR020846 GO:0022857
Vivi6g04035 481 Coils Coil 472 481 - -
Vivi6g04035 481 PANTHER - 41 476 - -
Vivi6g04035 481 SUPERFAMILY MFS general substrate transporter 36 475 IPR036259 -
Vivi6g04035 481 PRINTS Sugar transporter signature 292 302 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi6g04035 481 PRINTS Sugar transporter signature 140 159 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi6g04035 481 PRINTS Sugar transporter signature 404 416 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vivi6g04035 481 PRINTS Sugar transporter signature 381 402 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04035 Vivi-Chr6 137762419 137766064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04035 3 480 Organic Solute Cotransporters AT5G18840 57.676 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04035 K03444 - gmx:100785248 782.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04035 6 137762419 137766064 Vivi6g04035 6 137762419 137766064 ECH