Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04034 ATGATGTCTGGCTCAGAACTGATACAGAAGATTGAAGATTTAACCATGAATGCCAAACATCACCAGTTGGAGACTCTTGGCTCTATTCTTCTTCACAATTCCTCTTCACATTATCTTCAATCTTTCTCCAATAACAATACTCTTGATCCTTCCACTTTCACAAGTCTTGTTCCACTCTCTACCTATGAAGATTACATTGACTTTATTCAACAGATGGCTGATCATCATCCTAATCATCACCCTCTTCTCTCTGTTGATCCTCTTCTATGTTTCTTCTACAGCTCGGGAACCACGTCGATGAAACCAAAGCTCATCCCTTACTTTGATTCAACCCTTTCGAAAGCAGCATCATTTATTGCTCACACAGGGAGTATTGCTGTTCTTCATAGCCAGTTTCCTCCAAGGCCAAATATCAACAAGATCCTGTTGTTTCTCTATGCTGACAAATCTACTACTACAACTAAAAGTGGCTTAAAGGTTACGGCAGCCTCTTCATACCCTTTACAAAGTGGTAAAGTATCTTCTGCACAACTTTCCAGGTTCTCCAGTCCCCTACAAGTTATGCTTGGATCTAATGTGGATCATCAAATGTATTGCCATCTTTTATGCGGCCTTAGGAACATTGATGTTATAGATGGAATTAGTACTCCTTATGCTATAGGTTTGATTAAAGGATTTGGTTTTTTGGAGTCCAAGTGGGAGCAGCTATGTCATGATCTTGATTGTGGTTATCCGAGTCATGAAATTTCTGATTTGGAAATGAGAGAAGGAGTAATCAACACACTTGGTGGTCCTCAACATGAATTGTCAGCCAGAATAAGATTAGTTTGTGCAGATAAAAACTGGGATGGGATTGTACGTAGATTGTTTCCGAATGTTCGGTTTATCAGGTGTGTTACGACAGGGAGCATGACGCAGTACTATCAAAAACTTAAGTTTTATGCAGGAGATGTACCGATTTTAGGAGGTGATTACTTTGCTTCCGAGTGTTGTGTAGGTTTAAATTTAGACTTAACGCAACCACCAGAGACAACACGATTCGTTATACTTCCTACTTTTGCATACTTTGAGTTTCTTCCATTTGAGATGAATAATAATGATGATGTTGTCGACGAACAAACAGTAGACCTTTGCAGCGTTGAGGTTGGGAAGATGTATGAAGTGGTTGTTACTACTTACCGAGGATTTTATCGATACAAACTAGGGGATATAGTTAGAGTTGTTGGTTTTTATAATTCATCGCCTCAAGTGGAATTTGTGATGAGGGCACCTAAGTCTTCCGCTGAGATTATAACTGAGAAAGACTTGATATCAGCAGTTGAGAATTTTCAACTTGCAATTAGAGGTGCTATGGGAATTGACTCAATTGAGATTGTTGAGTTTGCAAGTTTCTTGGATCAGGAACCGGTGTCGAAGCAGTTGAAGGTATTTGTAGAAGTTCAAGAGGAATCTAAATTTTCAGAGGAATGGATTAAAGTGTTTAAAAGTTGCATTTCATCTCTTGAGAGCGGTTTGGGAGCATTGTACAAGGTGCAGAAGCATAAAGCTCATTTAGGGAAATTAGTGATGATCATCCTAAGGAATGGAGCCTTTGATAAGTTATCAGAATTGGCCATTAAGAAGGGAACATCAGCTAGTCAATATAAGCCACCAAAGATTATAAGGAATACTGAAGTTGTCAAACTCTTGGAAAAGTTCGCTTTTGTTACCGTATCAATGGATGACTAA 1728 0.3889 MMSGSELIQKIEDLTMNAKHHQLETLGSILLHNSSSHYLQSFSNNNTLDPSTFTSLVPLSTYEDYIDFIQQMADHHPNHHPLLSVDPLLCFFYSSGTTSMKPKLIPYFDSTLSKAASFIAHTGSIAVLHSQFPPRPNINKILLFLYADKSTTTTKSGLKVTAASSYPLQSGKVSSAQLSRFSSPLQVMLGSNVDHQMYCHLLCGLRNIDVIDGISTPYAIGLIKGFGFLESKWEQLCHDLDCGYPSHEISDLEMREGVINTLGGPQHELSARIRLVCADKNWDGIVRRLFPNVRFIRCVTTGSMTQYYQKLKFYAGDVPILGGDYFASECCVGLNLDLTQPPETTRFVILPTFAYFEFLPFEMNNNDDVVDEQTVDLCSVEVGKMYEVVVTTYRGFYRYKLGDIVRVVGFYNSSPQVEFVMRAPKSSAEIITEKDLISAVENFQLAIRGAMGIDSIEIVEFASFLDQEPVSKQLKVFVEVQEESKFSEEWIKVFKSCISSLESGLGALYKVQKHKAHLGKLVMIILRNGAFDKLSELAIKKGTSASQYKPPKIIRNTEVVKLLEKFAFVTVSMDD 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04034 575 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 4 566 IPR004993 -
Vivi6g04034 575 Pfam GH3 auxin-responsive promoter 10 557 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04034 Vivi-Chr6 137760248 137762292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04034 5 570 EF-hand Containing Proteins AT1G23160 31.207 7.16e-90 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04034 K14487 - gmx:100786829 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04034 6 137760248 137762292 Vivi6g04034 6 137760248 137762292 ECH