Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04012 ATGGCGACTTTGGTCGATATCGGTTATTCGGCAGCCATCAATCTGACATCTGCAATCATATTCCTTTTGGCGTTCGCAGTGTTGCGACTTCAGCCTTTTAATGATAGGGTCTACTTCCCAAAATGGTACCTCAAGGGGATAAGATCCAGCCCAACAAATTCCAGATCAATTGTCAAGAAATTTGTTAACCTTGACTTTGGGACCTACATTAGGTTCCTCAATTGGATGCCTGCAGCATTGCATATGCCTGAGCCTGAGCTTATTGATCATGCAGGCCTTGATTCTGCTGTCTTTATTCGGATTTATGTCCTCGGTGTCAAAATATTTGCCCCAATTACGCTACTGGCTTTTATGGTTTTGGTTCCTATAAACTGGACTGGAAAAACTTTGAATGCACCAGCCAAGGATTTGACATTTAGCAATATTGACAAGCTTTCAATATCCAACATTCCATTTGGATCAAACAGGTTTTGGGCGCATATTGGTATGTCATATGTCTTCTCAGCTTGGACATGTTATAGCCTTTATAAGGAATATATGATTGTTGCATCAATGAGATTGAGATTTTTGGCTTCTGAACGTCGTCGTCCAGATCAATTTACTGTCTTGGTGAGGAATGTTCCCCCGGATATGGACGAATCAGTCAGTGAACACATTGAACATTTCTTTTGTGTCAACCATCCTGAACACTATTTGATGCATCAAGTCGTTTATAATGCAAACACACTTGCATCAATAGTTGACCAGAAAAAGAGATTGCAAAACTGGTATGTTTACTATCATAACAAATATGAAAGAGACCCTACAAAGAGACCAACTACTCGGACAGGTATGATGGGTCTCTTGGGGACTAAAGTTGATGCCATTGATCACTATACTGCATTGATCGAAAAGTTGAGTGAACAAGAAGCTGAAGAAAGAGAAAATGTTACAAATGATCCCGATGCTATTATCCCTGCAGCATTTGTATCTTTCAAAACCCGATGGGGGGCGGCTGTCTGCGCTCAAACTCAACAAACCAGTGATCCTACCGTATGGCTGACAGAATGGGCTCCTGAGCCTAGGGATGTCTACTGGGAGAATCTTGCAATTCCATATTTTGACCTGAACCTTAGAAGATTGCTCACCACTGTCTCTTTGTTTTTCCTTACTTTCTTCTTTATGATACCTATAGCCTTTGTCCAATCTCTAGCTAATATTGAGTCAATCGAGAAGGTCCTTCCTTTCTTGAAATCAGTAATTGAAAAGCCATCTGTAAAGTCTGTTATTCAAGGATTTCTTCCAGGGCTAGCTTTAAAGTTATTTCTCATAATGCTTCCAAAATTACTTATGACAATGTCCAAAATAGAAGGTTTTTCATCGTTTTCCGGTTTGGAACGGAGATCAGCTTCCAAATATTATTTGTTTGTTCTCGTCAACGTGTTCCTTGGGAGTATTGTAACAGGAACGGCATTTCAGCAACTCCAGACTCTTATTAATGAGCCCTCTTCAGAGTTTACAAAAACTGTTGGCAGTACAATCCCCATGAAAGCCTCGTTCTTCATGACATACATTATGATAGACGGGTGGGCTGGAGTATCTGGAGAAGTCCTCAGGTTATCTACGTTAATCACGTTCCACCTGAAAAACACATTTTTAGTGAAAACGGAGCAAGACAGACAGAACGCCATGGATCCCGGTAGCTTGGATTTTGCTACATCTGAACCTAGAATCCAGTTATATTTCATGCTGGGGCATGTCTATGCTCCAGTCACACCTTTACTTCTTCCCTTCATTGTAGTCTTCTTTGCTTTTTCCTACCTGGTCTTTCGGCACCAGATTATCAATGTGTATAACCAGCAATACGAGAGTGGAGCAACGTTTTGGCCAGATGTCCACCGTCGAGTAATCATCGGCTTGATTATATCTCAAATTCTTCTGATGGGATTGCTTAGTACAAGAGGTGCAAATAAGTCGACACTATTGCTTGTTGCACAACCTGTCTTGACATTCTGGTTCCACAGATACTGCAAAGGGCGCTTCGAATCTGCATTCGTAAAATTCCCACTAGAGGATGCCATGGTGAAGGATACACTTGAAAGGGCTGTTGAACCAAACTTGAACCTTAGACTTTATCTTGAGGATGCATACGTACACCCAGTTTTTAAGGGTGACGAGTACGAAAAACCTGTGATAGTTGATGATGAAGAGGAGAATCCTCTTATTCAAACAAGAAGAACTTGTCGGAGTAGCAAGCCAGAATCTGAAAATGAAGCTGCCAGTGCAGGCAGTTGCTAA 2277 0.4133 MATLVDIGYSAAINLTSAIIFLLAFAVLRLQPFNDRVYFPKWYLKGIRSSPTNSRSIVKKFVNLDFGTYIRFLNWMPAALHMPEPELIDHAGLDSAVFIRIYVLGVKIFAPITLLAFMVLVPINWTGKTLNAPAKDLTFSNIDKLSISNIPFGSNRFWAHIGMSYVFSAWTCYSLYKEYMIVASMRLRFLASERRRPDQFTVLVRNVPPDMDESVSEHIEHFFCVNHPEHYLMHQVVYNANTLASIVDQKKRLQNWYVYYHNKYERDPTKRPTTRTGMMGLLGTKVDAIDHYTALIEKLSEQEAEERENVTNDPDAIIPAAFVSFKTRWGAAVCAQTQQTSDPTVWLTEWAPEPRDVYWENLAIPYFDLNLRRLLTTVSLFFLTFFFMIPIAFVQSLANIESIEKVLPFLKSVIEKPSVKSVIQGFLPGLALKLFLIMLPKLLMTMSKIEGFSSFSGLERRSASKYYLFVLVNVFLGSIVTGTAFQQLQTLINEPSSEFTKTVGSTIPMKASFFMTYIMIDGWAGVSGEVLRLSTLITFHLKNTFLVKTEQDRQNAMDPGSLDFATSEPRIQLYFMLGHVYAPVTPLLLPFIVVFFAFSYLVFRHQIINVYNQQYESGATFWPDVHRRVIIGLIISQILLMGLLSTRGANKSTLLLVAQPVLTFWFHRYCKGRFESAFVKFPLEDAMVKDTLERAVEPNLNLRLYLEDAYVHPVFKGDEYEKPVIVDDEEENPLIQTRRTCRSSKPESENEAASAGSC 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04012 758 Pfam Late exocytosis, associated with Golgi transport 7 178 IPR032880 -
Vivi6g04012 758 Coils Coil 289 309 - -
Vivi6g04012 758 Pfam Calcium-dependent channel, 7TM region, putative phosphate 372 644 IPR003864 GO:0016020
Vivi6g04012 758 Pfam Cytosolic domain of 10TM putative phosphate transporter 199 361 IPR027815 -
Vivi6g04012 758 MobiDBLite consensus disorder prediction 737 758 - -
Vivi6g04012 758 PANTHER PROBABLE MEMBRANE PROTEIN DUF221-RELATED 7 719 IPR045122 GO:0005227
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04012 Vivi-Chr6 137278201 137284824 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04012 K21989 - gmx:100776693 1267.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04012 6 137278201 137284824 Vivi6g04012 6 137278201 137284824 ECH