Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04011 ATGGCACCTACTCGAAAAAAGGGCGCCAAGAAATCACTCGCCGCAGCTGCTGCTTCCCGGGTATGGAAAAACGGCGATCTCGTAATGGCTAAAGTGAAAGGATTCCCTGCTTGGCCTGCTACGGTAAGTGAGCCGAACAAATGGGGTTACTCAGCTGATCGGAAGAAAGTATTTGTTCTCTTCTTTGGAACCGATCAAATTGCTTTCTGCAATCCTGCTGATATTGAGGCATTTACTGAAGAGAAGAAACAGTCTCTTGGCAAACGTCAAGGAAGGGGTGCTGATTTTGTTCGTGCATTAAATGAGATTATTGAATGTTACGATAAGTTAGAGAGAGGGACTCAAGTTGATGAAACTAGCTCTGGTGGTGAAGTTGCTAATGCAAATGTGGGAAATCCACTTGACCCATCTTCCAACTCAGGGTTCAAAGATCAGTTGAATACTCCTTGGGCGATTAATTCACAAATGAAATTATCAAATTCTCTGACTGGCAGACGTGAGCAAGTTTATGCAGCTGAGGATGGCTCATTTGGTGTACCGAGGAATGGAACTTATATTAAACAGGCTACAGGTGACGCTGTTGCAACTGGACGTGTAAAATCTTTTTTGCCAGTGAAGCAAGAAAATGAACCAGTTCAAAGGTCCAGAAGCTCATCAAAGATCCAAAACACTGCTCTACATCGTAGTGATGGTCGAAATAATGGTGGCAATAATGATGGCAACATATCAGCTGATACAATTCAGAACAAATTTATTAGAAGAAGGATTAGGCATATCAAGAAATCACCTGATCTTTTTGGGTGCAATGATACTGATTCCTCTGCATTTGCCTCAAATGTTAGCATGGTGGAAAATGGTTCTGAAATGGTTACAAACAATTCTGATGCCTGTAGCTTAAATGTGGGAAGTGCCAATTCTGATTTAAAACTTGAACAATCTGAGATTATTGAGGGCTCTAAATATGAAGTTGAGTTAAAGAAAGTCCTTGGTCGTGACATGAAGGCTGTAGTTGGCAAGAGGAAAAGAAAACCCAACAGGACAAGGAAAACCAATAATGCTTGTGTTCAGAATGCCAATCAAAGTTTGCAGAATACGTCTGAAAATCCGAAAGAGATATGCTCTTACCCGGATGGAGATGAACACTTACCCCCGTCGAAACGAGCCAGAGTTAGAATGATTAGCTCATCATCCACAGGGGAAGAACACAATAAAATTGCACAAGTACAGGAGAAAAGTATTGTTATTGTTGCTTCACCATTGCGGATAATCACATCGTCAAATAGTGAAAATGGCTGCCTTGCTGATGGAGACTCATTGGCATGGAGTAAGGATTTGGCTAGTGTTTCTCCTAAATTATTAACTTCCTGTTCCGAAAATGGGTCACAGACTTCTGAAGTTAAGAAAGACCAATTACTTGGCTTCTCTATGGATGATGAATCTGCTTTACCTCCATCTAAACGCATCCATCGTGCATTAAAAGCAATGTCTTCCTATGCCGCTGCCGCTGCCGAAGGAACTTGTATTGAATCACCACCCTCTAAAATGCCTTCAAGTGGTAAATGTTGTATGTCTGCTGCAATCAAGAGATGTTCTTGTATGATTATTGATAACCAAGGAGGTAATGATTTAGAACCGAAAGGCTTGGACTCTTGTGGCACTGATTGTTCCAATAACCGAGTGTGTAGTTTTTCAACCTGTTCAAATCCAATGAGTTTAATAGAGGACAAGTCATCTACTGAAGAGGAGGAACAGTTGACCAATTCACAAAAACATGAGTCTAGCAAGGATATCATCCCAGCCCCAGGTGCTGGGCTCCAAATCGGTGAAGATCTTAGTGATTCTATGGCCTGTGCACCTGCTAATATAGATTCACAAGTTGTAATACATGAAGAAATCTCTCCTAATGTTGATATGAAATGTTGTCAAGTTGGAAGCAATCAAGATTCATCAGGTCCGTCATTACCACCAAGTGAGAATGAAAGTATCAGACACTTGATCCCTTCAAATGCATCTGATACATTTGATCATGGTGGAATAAATCTTGATCCTGTGACGGGTCCCAATGAAAGTGGCAAATCGTGTCCCAACGAAAGTGGCAAATTGTTGCCTCAAAATAGTATCGCCATGCCTCAGAATATGGTGATGGTTTGTGAGGATATGAAGCAAGCATCTGGCGACAGCAGTAAAATCAATGAAAAGCACGAGGTTGTGAAAGAAGTAAAATTTAAAAAACAGGAGGGGGATATGATTTCTCTATCAATATCTGATTGTTCAAGGGAAAACAGTGTTTTGGGCATTCGAGCTAGCTCATCCTTGCCTGATGGGGGAGTTTGCCTTCCACAAGGTTCACCTCCAAATACCTCAGTTCGCAATGTTTCTACATCAGATAGTAGTAATATTCATCAAAATGGAAGCTGTAGTCCCGATGGACTCCAGAAGAGTATTTTATCTGGTTCTATTGATGGATGGAAAGTTGGGGCTGTGGCAAATCAACGATCGAGATCTATAGACAAATCAACTGAAGCAGGACACGCGGCTTTGTTATATTTTGAAGCAGTGCTTGTGACCTTGAAAAGGACAAAGGAAAGTATTGGTCGAGCAACACGCATTGCTATTGATTGTGCAAAGTTTGGCATTGCAACAAAGGTGGTGGAAAGTCTTGTCCACAGTCTGGAAAATGAGCCAAGCCTTCGGCGGAGAGTGGATCTGTTTTTCCTTGTTGACTCTATTGCTCAATATTCTCGAGGTTTGAAAGACGATGTTGGTGGAGTATATCCAGCTGCTATGCAAGCAGTCTTGCCACGGCTATTGTATGCTGTTGCCCCTCTTGGAAATACTGCACCTGAAAATCGTAGGCAGTGTCTTAAGGTGTTAAGACTCTGGTTGGAGAGAAGAATCCTACCAGAATCCATTATTCGCTATCACATCCGGGAACTAAACTCATATAGCAGGTCAGCTTATGCAGGGGTTTATTCACGCCGTTCATTGAGAACAGAAAGGTCTTTAGATGATCCTATTAGAGATATGGAGGGTATGCATGTTGATGAATATGGAAGCAACTCGAGTTTTCAGGTATCTGGATTTCGCATGCCCTGTATGCTTGAAGAAGGAGGGAGTGATTCTGATGGAGGGAACTTGGAGGCAACCGCGACTACGCATGATTCTGAAACATATGAAGTACAAGAAGTGTCTGATGCATTTGAAAAACATAGGCGTGTGCTGGAAGATGTTGCCGGCGAGCTTGAAATGGAAGATGTGACACCCTCTTTTGGTGTGGAATTGAATTCGATTTGTAATATCGATGGAAGAACGGCATCACAGCTTGATCAGAAACCTCCTCTGTCCTTTGCTCCTTGTTTAACCCAAGATGTGCCATCATCTTCCCCAGCTCCACCATCATTTGCTCCACCACCACCACCACCACCACCACCATCTTCTCCACCTCCACCTCCACCTCCACCGCCCCCACCAACACTGCATCTCATGTCAGCTACATCTGATCAATACGGCACTTCAGTTGATTCAAAACCTTTTACAGATTCACAGGGAGTGCATGGCAAAACATTTAATTCTGTGGCTCATCCCTTAGATGCCCCAAGAAATAGTCGACCTATGGATGCAACACAGTCTCAAATTCCCGAGTGTAGAGACGTGCAAATGCAGATACCAGAGTCTCCTTGCTCTTTCAACACTCACCCTGTACGACCACCAGAAAATTCCAGGAGTGCTGACGGTTTTACTATGCACAATGAAGGTTACATACTACGACCACCACACCGTGTGCCATCGGATCAGTTTTCTTTCATTCATGCGGAAAATCGTCCAAGGCCTCAGAGGGAGGTTCCACCACCCCCTTCATACTCCAATAGACAACACTTTATGCAGAACACAAGGAGGGAGAACTTCTATAACACTCACGAGAGAGATGGAATGAGATACAATACTCGTGCACTGCATGAAGAGAGATACAATACCCGTGCACTACATGAAGAGAGATGGAATACTAGGACAGCACGTGAAGAGAGGTGGAATACTCGGGCACCGCGTGAAGAGAGGTGGAATACTCGGGTACCCCATGAAGAGAGATGGGGTTTTCGGACACCATATGAAGAGAGATGGAATACTCGGTCGCCATATTCTGATGTGCCTTCCCCTTATGATTACCATCCAAGTGCATCGACTAGATCAGCAGGTCATGGTTGGAGATTAACTCACCTGCCAATGAGTTACAGAGGCTCCCTGCCCTTTAGGTCACCCTTCCATGATGCAATTCCAGTAGTTCACCGAGGCCCAAGCTTTTGGCGGCCTAGGAGAACTGACGTTAACCGACAATGA 4335 0.4358 MAPTRKKGAKKSLAAAAASRVWKNGDLVMAKVKGFPAWPATVSEPNKWGYSADRKKVFVLFFGTDQIAFCNPADIEAFTEEKKQSLGKRQGRGADFVRALNEIIECYDKLERGTQVDETSSGGEVANANVGNPLDPSSNSGFKDQLNTPWAINSQMKLSNSLTGRREQVYAAEDGSFGVPRNGTYIKQATGDAVATGRVKSFLPVKQENEPVQRSRSSSKIQNTALHRSDGRNNGGNNDGNISADTIQNKFIRRRIRHIKKSPDLFGCNDTDSSAFASNVSMVENGSEMVTNNSDACSLNVGSANSDLKLEQSEIIEGSKYEVELKKVLGRDMKAVVGKRKRKPNRTRKTNNACVQNANQSLQNTSENPKEICSYPDGDEHLPPSKRARVRMISSSSTGEEHNKIAQVQEKSIVIVASPLRIITSSNSENGCLADGDSLAWSKDLASVSPKLLTSCSENGSQTSEVKKDQLLGFSMDDESALPPSKRIHRALKAMSSYAAAAAEGTCIESPPSKMPSSGKCCMSAAIKRCSCMIIDNQGGNDLEPKGLDSCGTDCSNNRVCSFSTCSNPMSLIEDKSSTEEEEQLTNSQKHESSKDIIPAPGAGLQIGEDLSDSMACAPANIDSQVVIHEEISPNVDMKCCQVGSNQDSSGPSLPPSENESIRHLIPSNASDTFDHGGINLDPVTGPNESGKSCPNESGKLLPQNSIAMPQNMVMVCEDMKQASGDSSKINEKHEVVKEVKFKKQEGDMISLSISDCSRENSVLGIRASSSLPDGGVCLPQGSPPNTSVRNVSTSDSSNIHQNGSCSPDGLQKSILSGSIDGWKVGAVANQRSRSIDKSTEAGHAALLYFEAVLVTLKRTKESIGRATRIAIDCAKFGIATKVVESLVHSLENEPSLRRRVDLFFLVDSIAQYSRGLKDDVGGVYPAAMQAVLPRLLYAVAPLGNTAPENRRQCLKVLRLWLERRILPESIIRYHIRELNSYSRSAYAGVYSRRSLRTERSLDDPIRDMEGMHVDEYGSNSSFQVSGFRMPCMLEEGGSDSDGGNLEATATTHDSETYEVQEVSDAFEKHRRVLEDVAGELEMEDVTPSFGVELNSICNIDGRTASQLDQKPPLSFAPCLTQDVPSSSPAPPSFAPPPPPPPPPSSPPPPPPPPPPPTLHLMSATSDQYGTSVDSKPFTDSQGVHGKTFNSVAHPLDAPRNSRPMDATQSQIPECRDVQMQIPESPCSFNTHPVRPPENSRSADGFTMHNEGYILRPPHRVPSDQFSFIHAENRPRPQREVPPPPSYSNRQHFMQNTRRENFYNTHERDGMRYNTRALHEERYNTRALHEERWNTRTAREERWNTRAPREERWNTRVPHEERWGFRTPYEERWNTRSPYSDVPSPYDYHPSASTRSAGHGWRLTHLPMSYRGSLPFRSPFHDAIPVVHRGPSFWRPRRTDVNRQ 1444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04011 1444 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 116 146 - -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 1272 1291 - -
Vivi6g04011 1444 SMART 558neu5 849 980 IPR006569 -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 775 805 - -
Vivi6g04011 1444 Gene3D - 3 106 - -
Vivi6g04011 1444 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1084 - -
Vivi6g04011 1444 ProSiteProfiles CID domain profile. 842 983 IPR006569 -
Vivi6g04011 1444 Pfam CID domain 850 972 IPR006569 -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 1161 1188 - -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 574 602 - -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 1129 1160 - -
Vivi6g04011 1444 SUPERFAMILY Tudor/PWWP/MBT 22 114 - -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 1107 1208 - -
Vivi6g04011 1444 Pfam PWWP domain 25 107 IPR000313 -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 208 244 - -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 575 590 - -
Vivi6g04011 1444 SMART PWWP_4 22 79 IPR000313 -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 1036 1061 - -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 781 805 - -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 115 146 - -
Vivi6g04011 1444 Gene3D - 848 987 IPR008942 -
Vivi6g04011 1444 MobiDBLite consensus disorder prediction 206 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04011 Vivi-Chr6 137237070 137248230 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04011 - - vvo:131610170 2777.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04011 6 137237070 137248230 Vivi6g04011 6 137237070 137248230 ECH
Vivi6g04011 6 137237070 137248230 Vivi1g06364 1 143782966 143800312 PCT